| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is yhjE [H]
Identifier: 114332205
GI number: 114332205
Start: 2370098
End: 2371369
Strand: Direct
Name: yhjE [H]
Synonym: Neut_2245
Alternate gene names: 114332205
Gene position: 2370098-2371369 (Clockwise)
Preceding gene: 114332204
Following gene: 114332206
Centisome position: 89.07
GC content: 50.86
Gene sequence:
>1272_bases ATGTCCCACCCTTTTTATCAGCATCGCCGCATACTGATTGCAAGCCTAGTCGGCACAACCATCGAATTTTATGATTTTTA TATTTATGCCACGGCAGCGGCACTGGTATTCGGACCTTTATTCTTTCCTGCAGAATCTCCGTCTGCACAATTAATGTTGT CATTCCTGAGCTTTGGACTCGCCTTCCTCGCGCGGCCGGTTGGCGCAATATTATTCGGCCATTTTGGTGATCGTATTGGA AGAAAATCAACACTGGTCGCCTCATTGTTGCTGATGGGCATATCAACCCTGCTGATTGCATTCTTGCCCACCTACGCGAC AGCAGGCTGGATAGCTCCGTTACTATTGTGCACCCTGCGTTTTGGTCAGGGACTGGGACTTGGCGGCGAATGGGGCGGCG CGGCTTTATTGGCTGTTGAATACGCTCCCCCGGGATGGGGTGCGCGGTTTGGTATGATTCCTCAGTTAGGTGCTCCAATT GGATTCATTGCCGCAAACGGATTGTTTTTGCTTCTCGGTACGGCGTTGAGTGAAACAGACTTTGCAGCATGGGGATGGCG AATCCCATTCCTTACCAGTGCAATTCTGGTTGGACTTGGTTTATGGGTGCGGCTGAAAATTAATGAAACACCCGAATTTA CCCGGGCACTGGCAAAAGATCCTCCCATTCCGGTTCCCATCGGCGAGCTGATACGCAAGCATGCCGCTATCACCTTTGCC GGAACGTTTACAGTAGTTGCCTGTTTTGCCATCTTTTATCTTTCAACCGCTTTTGCACTGGCTCATGGCACTACGACACT TGGATACGATCGTGAGCTGTTTCTGCTCACTCAGCTTGCAGCAATATTATTTCTGGCTATTGGTATCGTTCTCTCGGGAA TACGTGCCGATCAGCATCACGCAAACCAGGTACTGGTATGGGGATGTGCAGCGACAATTATCCTGGGCTTAATATTTGGA CCAGCCTTGGGGGCGGGATCGCTATGGCTGGTCTGGATGGTGCTTTCGCTTGCCCTGTTTATAATGGGGTTTGTTTACGG CCCGCTTGGCGTATGGCTACCATCACTTTTCCCTCCGCGAATACGCTATACAGGCATATCTGTTGCCTTCAACTTAGGAG GTATTCTAGGCGGCGCACTCGCCCCCCTTGCCGCACAGGCACTTAATGATGCGGGAGGCACATCCTTTGTTGGCCTTTAT CTGACAATGGCAGGCATATTCAGCCTGGCAGGATTAAAAATGGCCAGGAGGCTGGCGCCAAACAAAGCGTAA
Upstream 100 bases:
>100_bases AGAGCTTCTGCAACACCAATGGAAATGTGCGCCAACTCCTGGCGCAATACGGCTTGAAGTATCCTGACAGCCCGGAAATC TCGAAGAAACTGATTTGACT
Downstream 100 bases:
>100_bases TAAAAAAGACTTACAACCCGCATAATATGTCCATACAAATTTAACTACAGCTATCCTTTTCTACCTCCGTTCTATTATGA ACCTCGTGTAGTCATATAAT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSHPFYQHRRILIASLVGTTIEFYDFYIYATAAALVFGPLFFPAESPSAQLMLSFLSFGLAFLARPVGAILFGHFGDRIG RKSTLVASLLLMGISTLLIAFLPTYATAGWIAPLLLCTLRFGQGLGLGGEWGGAALLAVEYAPPGWGARFGMIPQLGAPI GFIAANGLFLLLGTALSETDFAAWGWRIPFLTSAILVGLGLWVRLKINETPEFTRALAKDPPIPVPIGELIRKHAAITFA GTFTVVACFAIFYLSTAFALAHGTTTLGYDRELFLLTQLAAILFLAIGIVLSGIRADQHHANQVLVWGCAATIILGLIFG PALGAGSLWLVWMVLSLALFIMGFVYGPLGVWLPSLFPPRIRYTGISVAFNLGGILGGALAPLAAQALNDAGGTSFVGLY LTMAGIFSLAGLKMARRLAPNKA
Sequences:
>Translated_423_residues MSHPFYQHRRILIASLVGTTIEFYDFYIYATAAALVFGPLFFPAESPSAQLMLSFLSFGLAFLARPVGAILFGHFGDRIG RKSTLVASLLLMGISTLLIAFLPTYATAGWIAPLLLCTLRFGQGLGLGGEWGGAALLAVEYAPPGWGARFGMIPQLGAPI GFIAANGLFLLLGTALSETDFAAWGWRIPFLTSAILVGLGLWVRLKINETPEFTRALAKDPPIPVPIGELIRKHAAITFA GTFTVVACFAIFYLSTAFALAHGTTTLGYDRELFLLTQLAAILFLAIGIVLSGIRADQHHANQVLVWGCAATIILGLIFG PALGAGSLWLVWMVLSLALFIMGFVYGPLGVWLPSLFPPRIRYTGISVAFNLGGILGGALAPLAAQALNDAGGTSFVGLY LTMAGIFSLAGLKMARRLAPNKA >Mature_422_residues SHPFYQHRRILIASLVGTTIEFYDFYIYATAAALVFGPLFFPAESPSAQLMLSFLSFGLAFLARPVGAILFGHFGDRIGR KSTLVASLLLMGISTLLIAFLPTYATAGWIAPLLLCTLRFGQGLGLGGEWGGAALLAVEYAPPGWGARFGMIPQLGAPIG FIAANGLFLLLGTALSETDFAAWGWRIPFLTSAILVGLGLWVRLKINETPEFTRALAKDPPIPVPIGELIRKHAAITFAG TFTVVACFAIFYLSTAFALAHGTTTLGYDRELFLLTQLAAILFLAIGIVLSGIRADQHHANQVLVWGCAATIILGLIFGP ALGAGSLWLVWMVLSLALFIMGFVYGPLGVWLPSLFPPRIRYTGISVAFNLGGILGGALAPLAAQALNDAGGTSFVGLYL TMAGIFSLAGLKMARRLAPNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=409, Percent_Identity=47.6772616136919, Blast_Score=310, Evalue=8e-86, Organism=Escherichia coli, GI1788292, Length=403, Percent_Identity=37.7171215880893, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI1790550, Length=411, Percent_Identity=27.7372262773723, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1788942, Length=419, Percent_Identity=28.6396181384248, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI87082231, Length=475, Percent_Identity=24.8421052631579, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 44938; Mature: 44807
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPFYQHRRILIASLVGTTIEFYDFYIYATAAALVFGPLFFPAESPSAQLMLSFLSFGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AFLARPVGAILFGHFGDRIGRKSTLVASLLLMGISTLLIAFLPTYATAGWIAPLLLCTLR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGQGLGLGGEWGGAALLAVEYAPPGWGARFGMIPQLGAPIGFIAANGLFLLLGTALSETD HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC FAAWGWRIPFLTSAILVGLGLWVRLKINETPEFTRALAKDPPIPVPIGELIRKHAAITFA CHHCCCCHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEH GTFTVVACFAIFYLSTAFALAHGTTTLGYDRELFLLTQLAAILFLAIGIVLSGIRADQHH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ANQVLVWGCAATIILGLIFGPALGAGSLWLVWMVLSLALFIMGFVYGPLGVWLPSLFPPR CCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IRYTGISVAFNLGGILGGALAPLAAQALNDAGGTSFVGLYLTMAGIFSLAGLKMARRLAP EEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NKA CCC >Mature Secondary Structure SHPFYQHRRILIASLVGTTIEFYDFYIYATAAALVFGPLFFPAESPSAQLMLSFLSFGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AFLARPVGAILFGHFGDRIGRKSTLVASLLLMGISTLLIAFLPTYATAGWIAPLLLCTLR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGQGLGLGGEWGGAALLAVEYAPPGWGARFGMIPQLGAPIGFIAANGLFLLLGTALSETD HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC FAAWGWRIPFLTSAILVGLGLWVRLKINETPEFTRALAKDPPIPVPIGELIRKHAAITFA CHHCCCCHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEH GTFTVVACFAIFYLSTAFALAHGTTTLGYDRELFLLTQLAAILFLAIGIVLSGIRADQHH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ANQVLVWGCAATIILGLIFGPALGAGSLWLVWMVLSLALFIMGFVYGPLGVWLPSLFPPR CCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IRYTGISVAFNLGGILGGALAPLAAQALNDAGGTSFVGLYLTMAGIFSLAGLKMARRLAP EEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NKA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]