Click here to switch to the map view.

The map label for this gene is yyaL [H]

Identifier: 114332201

GI number: 114332201

Start: 2366947

End: 2367897

Strand: Direct

Name: yyaL [H]

Synonym: Neut_2241

Alternate gene names: 114332201

Gene position: 2366947-2367897 (Clockwise)

Preceding gene: 114332200

Following gene: 114332202

Centisome position: 88.95

GC content: 50.68

Gene sequence:

>951_bases
GTGGTGCAATCAATCGAGGCAGTTGCAGCAAATAATCAAATCCATTCGGAAGCTGCGCAACAGCTCATTGACAGCGCACG
CAAGAAGTTACTAAACGAACGTGAGCAGCGTATCCGGCCGGGACGTGATGAAAAAATACTGACCAGCTGGAATGCGCTGA
TGATCAAGGACATGGCGCGCGCCGGACAGATTTTTGAACGTGGGGAATGGATTGATTCAGCCGTGCAGGCAATGGATTTC
ATCCACGACAGGCTATGGCAGGATAGCTGCCTGCTGGCAACGTTCAAGGATGGCAAAGCGCATCTGAATGCCTATCTGGA
TGATCACGCCTTCCTGCTGGATAGTCTGCTGACGCTGCTGCAAGCCCGCTTTCGACAGGCAGATCTTGATTTTGCCATCA
CCCTGGCAGATACACTGCTCACCCGGTTTGAAGATGAAACATCCGATGGATTTTTTTTCACCAGTCATGATGAGATACTT
ATTCATCGGCCTAAAACCGGTCACGATGGCGCCATTCCAGCCGGAAACGGTATTGCCAGCATAGCCTTGCAGCACCTGGG
CTATCTAGTGGGCGAGCCACGCTACCTCGAATCTGCCAAACGTACACTGGATATTTTCTCTGATGTGTTGTCACACCAGG
CCAGTTCGCATTGCAGCATATTGGTCGCGCTGGAGGAATTTCTGGAACCAACCCGGACAGTGCTCCTGTCTGGAGATGAA
GCAGAATTGCAGACATGGCTTAAGGCACTGGTTCCCTGTTCATTGAATATGATATCAATCGCATTGCCTCATGAACTTTC
CGGGTTACCCGATGGTCTTAAAAAACGCTCTGCCCCAGATGGAAAAATCAGCGCTCAAGTATGTGAGGGCAGGCGTTGTC
TTCCGGAGATTCATTCACTGAATGAACTGCTGCAAGTCTGCAGGGTTCACGGTAGAATGGCACTCCCTTAA

Upstream 100 bases:

>100_bases
GATTGCCGCGATTCTCACCAGGGAAGAATATGCGGCGACAGCCCCTTACTTTGGCCTTGATCGCCATCCCAACTTCGAAG
GTCAGCATTGGCATCTTGAA

Downstream 100 bases:

>100_bases
TCATTCATAAAAGGAAAAAACTGATGAAAACAGCTTGGTTAGGTGTATTTGCTGCTTCAGCGTTGTTAGTGGCCGGTTCT
GTTCAGGCCAGCCCCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MVQSIEAVAANNQIHSEAAQQLIDSARKKLLNEREQRIRPGRDEKILTSWNALMIKDMARAGQIFERGEWIDSAVQAMDF
IHDRLWQDSCLLATFKDGKAHLNAYLDDHAFLLDSLLTLLQARFRQADLDFAITLADTLLTRFEDETSDGFFFTSHDEIL
IHRPKTGHDGAIPAGNGIASIALQHLGYLVGEPRYLESAKRTLDIFSDVLSHQASSHCSILVALEEFLEPTRTVLLSGDE
AELQTWLKALVPCSLNMISIALPHELSGLPDGLKKRSAPDGKISAQVCEGRRCLPEIHSLNELLQVCRVHGRMALP

Sequences:

>Translated_316_residues
MVQSIEAVAANNQIHSEAAQQLIDSARKKLLNEREQRIRPGRDEKILTSWNALMIKDMARAGQIFERGEWIDSAVQAMDF
IHDRLWQDSCLLATFKDGKAHLNAYLDDHAFLLDSLLTLLQARFRQADLDFAITLADTLLTRFEDETSDGFFFTSHDEIL
IHRPKTGHDGAIPAGNGIASIALQHLGYLVGEPRYLESAKRTLDIFSDVLSHQASSHCSILVALEEFLEPTRTVLLSGDE
AELQTWLKALVPCSLNMISIALPHELSGLPDGLKKRSAPDGKISAQVCEGRRCLPEIHSLNELLQVCRVHGRMALP
>Mature_316_residues
MVQSIEAVAANNQIHSEAAQQLIDSARKKLLNEREQRIRPGRDEKILTSWNALMIKDMARAGQIFERGEWIDSAVQAMDF
IHDRLWQDSCLLATFKDGKAHLNAYLDDHAFLLDSLLTLLQARFRQADLDFAITLADTLLTRFEDETSDGFFFTSHDEIL
IHRPKTGHDGAIPAGNGIASIALQHLGYLVGEPRYLESAKRTLDIFSDVLSHQASSHCSILVALEEFLEPTRTVLLSGDE
AELQTWLKALVPCSLNMISIALPHELSGLPDGLKKRSAPDGKISAQVCEGRRCLPEIHSLNELLQVCRVHGRMALP

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=315, Percent_Identity=26.984126984127, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25147430, Length=313, Percent_Identity=26.517571884984, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI20129985, Length=312, Percent_Identity=26.2820512820513, Blast_Score=98, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 35252; Mature: 35252

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSIEAVAANNQIHSEAAQQLIDSARKKLLNEREQRIRPGRDEKILTSWNALMIKDMAR
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AGQIFERGEWIDSAVQAMDFIHDRLWQDSCLLATFKDGKAHLNAYLDDHAFLLDSLLTLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
QARFRQADLDFAITLADTLLTRFEDETSDGFFFTSHDEILIHRPKTGHDGAIPAGNGIAS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHH
IALQHLGYLVGEPRYLESAKRTLDIFSDVLSHQASSHCSILVALEEFLEPTRTVLLSGDE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHEEECCCH
AELQTWLKALVPCSLNMISIALPHELSGLPDGLKKRSAPDGKISAQVCEGRRCLPEIHSL
HHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHH
NELLQVCRVHGRMALP
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVQSIEAVAANNQIHSEAAQQLIDSARKKLLNEREQRIRPGRDEKILTSWNALMIKDMAR
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AGQIFERGEWIDSAVQAMDFIHDRLWQDSCLLATFKDGKAHLNAYLDDHAFLLDSLLTLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
QARFRQADLDFAITLADTLLTRFEDETSDGFFFTSHDEILIHRPKTGHDGAIPAGNGIAS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHH
IALQHLGYLVGEPRYLESAKRTLDIFSDVLSHQASSHCSILVALEEFLEPTRTVLLSGDE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHEEECCCH
AELQTWLKALVPCSLNMISIALPHELSGLPDGLKKRSAPDGKISAQVCEGRRCLPEIHSL
HHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHH
NELLQVCRVHGRMALP
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]