Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 114332197

GI number: 114332197

Start: 2361997

End: 2363142

Strand: Reverse

Name: yrbE [C]

Synonym: Neut_2236

Alternate gene names: 114332197

Gene position: 2363142-2361997 (Counterclockwise)

Preceding gene: 114332198

Following gene: 114332196

Centisome position: 88.8

GC content: 52.36

Gene sequence:

>1146_bases
ATGCCCTCTGATTTGCCGGTTGACCACAATCCCCGGCATCAACTTATTACCACAGAAGCAGGTAATTCCTGTCTGCAGCT
TACCGGTAGCTATACCCTCGTTTCGCTTAACCCATCATTACCCGCAGTTGCAAGGGAGCTGGCGCAGCTGGCCAGTCAAC
CTGGCCTGTACTGGGATCTGACGAATATCCACCAGCTTGATTACGCGGGCGCCGTGATGTTGTGGCAGATTTGGGGCGAG
CAGCGTCCTGATCATCTGCTGCTGCGCCCCGAGCAAGAACAAATGTTTCAGCGCTTGGAAAAAGTGGTATCGCTGCCTGA
ACCGACACAGCGCAAATGGTTTTTGCCTGTCTCCCTGCTCGGGCAACAGCTCCTCCGTTTTTTTGATCACCTCGCTGGCA
TGATTAGCCTTTCTGGCCAGATTGTGCTGGATATCGTTTACCTGATGACCCATCCAAGCAGGATTCCTGTGCGGGAAATT
TCTGCGAATTTGTATCGTACTGGCGCACAGGCACTTGGCATTACTGCCATCGTCGGATTTTTGATCGGTATTGTGCTGAG
CTATCTTTCCTCTGAACAGCTACATATGCTTGGAGCGGATATCTACATTGTCAATATTCTCGGGATGAGTATCATCCGGG
AGCTGGGTCCAATGCTGGCTGCCATATTGGTTGCTGGGCGCTCCGGTTCCGCCATGACTGCCCAGCTGGGGGTCATGCGT
GTGACCGAAGAACTGGATGCACTGACGGTAATGGGTATTCCTCATAGCCTGCGACTAGTATTGTCCAAAATTATCGGTCT
GAGTCTTGCTTTACCGCTGATCGTGCTCTGGACTAGCTCAGTTGCGCTGCTGGGCGGGCTTTTAGCGGCGGATCTGCAAG
TGGGATTAAGTATTCGTTACGCGGTGACTACCTTGCCCGATGCGGTACCAATCGCTAATTTATGGTTAGGACTGGGCAAG
GGAGTGGTCTGCGGCATGGCAATTGCCCTGATTGCCTGTCATTTCGGGCTGCGCATCAAACCGAATACCGAAAGCCTGGG
AGAAGGCACTACCAATTCAGTGGTGACTTCGATTACTGCCGTGATCATCATTGATGCCATTTTTGCAGTGGCTTTTTCCA
GTATCGGCATCAGGGTTGCAGGCTGA

Upstream 100 bases:

>100_bases
CTGGGCATACCGGCATGACCAAAAGCCGGAAAAGATTGCCCAGGATTCGCGGAACAAACGCAAAAACCGGAGCTAACAGT
CAAAATGGATTGGGATAGTC

Downstream 100 bases:

>100_bases
TGACAACTGCTGAACCAGTTATCGAAATTGCCGGATTGACTACTCGCTTCGGCCAGAATGTCATTCATGAAAATATCAAT
CTGACTGTGCTCAAGGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPSDLPVDHNPRHQLITTEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQIWGE
QRPDHLLLRPEQEQMFQRLEKVVSLPEPTQRKWFLPVSLLGQQLLRFFDHLAGMISLSGQIVLDIVYLMTHPSRIPVREI
SANLYRTGAQALGITAIVGFLIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMR
VTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTLPDAVPIANLWLGLGK
GVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIIDAIFAVAFSSIGIRVAG

Sequences:

>Translated_381_residues
MPSDLPVDHNPRHQLITTEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQIWGE
QRPDHLLLRPEQEQMFQRLEKVVSLPEPTQRKWFLPVSLLGQQLLRFFDHLAGMISLSGQIVLDIVYLMTHPSRIPVREI
SANLYRTGAQALGITAIVGFLIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMR
VTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTLPDAVPIANLWLGLGK
GVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIIDAIFAVAFSSIGIRVAG
>Mature_380_residues
PSDLPVDHNPRHQLITTEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQIWGEQ
RPDHLLLRPEQEQMFQRLEKVVSLPEPTQRKWFLPVSLLGQQLLRFFDHLAGMISLSGQIVLDIVYLMTHPSRIPVREIS
ANLYRTGAQALGITAIVGFLIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRV
TEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTLPDAVPIANLWLGLGKG
VVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIIDAIFAVAFSSIGIRVAG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41027; Mature: 40896

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDLPVDHNPRHQLITTEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDL
CCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEC
TNIHQLDYAGAVMLWQIWGEQRPDHLLLRPEQEQMFQRLEKVVSLPEPTQRKWFLPVSLL
CCCHHHHHCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEECCHHHH
GQQLLRFFDHLAGMISLSGQIVLDIVYLMTHPSRIPVREISANLYRTGAQALGITAIVGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMR
HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRY
HHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
AVTTLPDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITA
EEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHH
VIIIDAIFAVAFSSIGIRVAG
HHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
PSDLPVDHNPRHQLITTEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDL
CCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEC
TNIHQLDYAGAVMLWQIWGEQRPDHLLLRPEQEQMFQRLEKVVSLPEPTQRKWFLPVSLL
CCCHHHHHCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCEEECCHHHH
GQQLLRFFDHLAGMISLSGQIVLDIVYLMTHPSRIPVREISANLYRTGAQALGITAIVGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMR
HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRY
HHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
AVTTLPDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITA
EEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHH
VIIIDAIFAVAFSSIGIRVAG
HHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]