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The map label for this gene is 114332190

Identifier: 114332190

GI number: 114332190

Start: 2355877

End: 2356863

Strand: Direct

Name: 114332190

Synonym: Neut_2229

Alternate gene names: NA

Gene position: 2355877-2356863 (Clockwise)

Preceding gene: 114332189

Following gene: 114332191

Centisome position: 88.53

GC content: 53.8

Gene sequence:

>987_bases
ATGACCAGCCTGTTTGTTGATCGTCGCGGAGTAGTGCTTGAACTTGAATCCGGTGCCATTGTTTTTCGCGAAAATGGCGA
ACGTATTGGCACGGTGCCCATTGCGCCACTGACGCGCGTTTTTCTGCGTGGTGATGTCAAGTTGCCAGCCGCCCTGTTGG
GGAAACTGGGTGAACAGGGGGTGGGTGTTGTCATCCTGAGCGGGCGGATTGGCCGTCCCAGTTTGCTGCTGGCACGCCCA
CACAACGATGCAGCCCGGCGTGTTGTCCAGATCCGCCTGAGTTTTGACAAACCGTTCTGTTTGCAGATTGCCAAGGCACT
CATCGAACGTAAGCTGACACGTCAGATCGAATGGTTTGCCGAGCTACGCGAAAACGATATGCAGGTACGTTACGAACTCA
GCCACGCCTTACGCGCACTGGAGGAGCATCGGTCTCGTATCGGCCATGTCAGCAGTGCTGCCAGCTTGCGTGGTGTAGAA
GGTTCCGCTGCTGCGCGCTATTTTTCCGGTTTGCAGGCTGTTGTTCCGGATTCACTACATTTTAGTGGCCGCAACCGTCG
CCCGCCGCGTGATCCTTTCAATGCCCTGCTTTCGCTCACTTATACCCTGCTGCATAGTGAAATTGCCATTGCGCTGTATG
GTACCGGGTTTGATCCTTACGTTGGTTTTTATCATCGTCTGGCCTTTGGTCGGGAATCACTCGCTTCCGATTTGCTGGAG
CCTTTGCGCCCGCTGGCGGATCAGTTTGCGCTTGCACTGATACGCAAGAAAGTATTGGAAAAAGATCATTTTTCGACGAC
AGAAGCAGGTTGCCTGCTTGGCAAGGCTGGCCGTACGCGCTATTACGCTGCCTATGGGGAGCACAGTGAAACCCTGCGCA
AAGGCATTAACCAGGAAATTGAGTGGTTAACAGCGCAGGTGAACGAGATTCTGGCCACAGCGGAAGATGATGTGCAACCA
GATGATAGTTTTGAAGATTTCGGCTAG

Upstream 100 bases:

>100_bases
TTCTCAGTCTTGATCCACGTATGAAGCCGCGTTGTTACGGCAAAGCCAGCACATTCACGGCACAGTATTTCTGCATCACC
TGAAAACAAGGAAAAACGAT

Downstream 100 bases:

>100_bases
AGTAGTTAATGAGTGATTTTATTATCTGTTATGACATTACGCACCCGCGACGGCTGGCGCGCTTGCATCGCTATCTGGTA
AAACGTGCCGTACCGTTGCA

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTSLFVDRRGVVLELESGAIVFRENGERIGTVPIAPLTRVFLRGDVKLPAALLGKLGEQGVGVVILSGRIGRPSLLLARP
HNDAARRVVQIRLSFDKPFCLQIAKALIERKLTRQIEWFAELRENDMQVRYELSHALRALEEHRSRIGHVSSAASLRGVE
GSAAARYFSGLQAVVPDSLHFSGRNRRPPRDPFNALLSLTYTLLHSEIAIALYGTGFDPYVGFYHRLAFGRESLASDLLE
PLRPLADQFALALIRKKVLEKDHFSTTEAGCLLGKAGRTRYYAAYGEHSETLRKGINQEIEWLTAQVNEILATAEDDVQP
DDSFEDFG

Sequences:

>Translated_328_residues
MTSLFVDRRGVVLELESGAIVFRENGERIGTVPIAPLTRVFLRGDVKLPAALLGKLGEQGVGVVILSGRIGRPSLLLARP
HNDAARRVVQIRLSFDKPFCLQIAKALIERKLTRQIEWFAELRENDMQVRYELSHALRALEEHRSRIGHVSSAASLRGVE
GSAAARYFSGLQAVVPDSLHFSGRNRRPPRDPFNALLSLTYTLLHSEIAIALYGTGFDPYVGFYHRLAFGRESLASDLLE
PLRPLADQFALALIRKKVLEKDHFSTTEAGCLLGKAGRTRYYAAYGEHSETLRKGINQEIEWLTAQVNEILATAEDDVQP
DDSFEDFG
>Mature_327_residues
TSLFVDRRGVVLELESGAIVFRENGERIGTVPIAPLTRVFLRGDVKLPAALLGKLGEQGVGVVILSGRIGRPSLLLARPH
NDAARRVVQIRLSFDKPFCLQIAKALIERKLTRQIEWFAELRENDMQVRYELSHALRALEEHRSRIGHVSSAASLRGVEG
SAAARYFSGLQAVVPDSLHFSGRNRRPPRDPFNALLSLTYTLLHSEIAIALYGTGFDPYVGFYHRLAFGRESLASDLLEP
LRPLADQFALALIRKKVLEKDHFSTTEAGCLLGKAGRTRYYAAYGEHSETLRKGINQEIEWLTAQVNEILATAEDDVQPD
DSFEDFG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 36549; Mature: 36418

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLFVDRRGVVLELESGAIVFRENGERIGTVPIAPLTRVFLRGDVKLPAALLGKLGEQG
CCCEEEECCCEEEEECCCEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
VGVVILSGRIGRPSLLLARPHNDAARRVVQIRLSFDKPFCLQIAKALIERKLTRQIEWFA
CEEEEEECCCCCCCEEEECCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ELRENDMQVRYELSHALRALEEHRSRIGHVSSAASLRGVEGSAAARYFSGLQAVVPDSLH
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCHHHHCCCCEE
FSGRNRRPPRDPFNALLSLTYTLLHSEIAIALYGTGFDPYVGFYHRLAFGRESLASDLLE
ECCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHH
PLRPLADQFALALIRKKVLEKDHFSTTEAGCLLGKAGRTRYYAAYGEHSETLRKGINQEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEECCCHHHHHHHCCCHHH
EWLTAQVNEILATAEDDVQPDDSFEDFG
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSLFVDRRGVVLELESGAIVFRENGERIGTVPIAPLTRVFLRGDVKLPAALLGKLGEQG
CCEEEECCCEEEEECCCEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
VGVVILSGRIGRPSLLLARPHNDAARRVVQIRLSFDKPFCLQIAKALIERKLTRQIEWFA
CEEEEEECCCCCCCEEEECCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ELRENDMQVRYELSHALRALEEHRSRIGHVSSAASLRGVEGSAAARYFSGLQAVVPDSLH
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCHHHHCCCCEE
FSGRNRRPPRDPFNALLSLTYTLLHSEIAIALYGTGFDPYVGFYHRLAFGRESLASDLLE
ECCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHH
PLRPLADQFALALIRKKVLEKDHFSTTEAGCLLGKAGRTRYYAAYGEHSETLRKGINQEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEECCCHHHHHHHCCCHHH
EWLTAQVNEILATAEDDVQPDDSFEDFG
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]