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The map label for this gene is ychE [C]

Identifier: 114332172

GI number: 114332172

Start: 2337584

End: 2338228

Strand: Reverse

Name: ychE [C]

Synonym: Neut_2211

Alternate gene names: 114332172

Gene position: 2338228-2337584 (Counterclockwise)

Preceding gene: 114332173

Following gene: 114332169

Centisome position: 87.87

GC content: 54.26

Gene sequence:

>645_bases
ATGATCAACCCAATGGACCAGTACATACAGGCGATTGTCGCATTGCTTGCGATTGCCAACCCACTTTCTGCAGTTCCTGT
GTTCTTGCAAGCGGTCGATGGTCTCGACAGGACGCAGCGACGGAAATCCGCTTTGCTAGCGGCGATTTCTGTTTTCACCA
TCCTGTTCGTTGCCGCCGTCGCGGGGAACTGGATGCTAGACATTTTCGGTATTTCCATCTCCGCGTTTCGTTGTGGTGGC
GGATTGGTGATCCTGCTGATGGGGCTGACGATGCTGCAAGGCCGTACTTCGAGTGTCCAGCAGGAGTCACTCACTCACAA
CGAACGTCGAAGCAAGATTTTTGTGCCCATCGCCATGCCGCTCGTTGCCGGACCCGGAGCGATCACCACCGTGATCACCA
TTGCGCTTGCCGAGCCCTATTGGAAGAACCTGTCTGTCGCTTTGACGGCGATCGTGGTCTTGACGATGGTGCTCTGGGTC
GTGCTCCTGTTGTCGCAAGGCGTCCAAGGACTGCTTAGCCCTCTTGGTCAGAAGATATTACTGCGCTTTTTTGGTTTGAT
CCTGGTGGCCATCGGTGTACAGTTCATCCTGGCAGGTGCGTATGAGTTTTTCACCGATGCGATAGCTCAACAAGCACTTC
GATAG

Upstream 100 bases:

>100_bases
CTTTGTGAAGCTGGAAAGCAGGGATGGCAACAACCGAACGCTTGTGCTCCCCTTCGCTGACACGTAATCCCCCGAAAACT
GCTGCAACGATTCTATTAGA

Downstream 100 bases:

>100_bases
CAAGATCACTCTCAATAGCTTGACCTAAGCGGCAGTTCCGCTGCGTGTTTAGGTTGAGCGAATCATCACCCAGCTGGGAA
TGCCTAAAATAGTGGGTGTG

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MINPMDQYIQAIVALLAIANPLSAVPVFLQAVDGLDRTQRRKSALLAAISVFTILFVAAVAGNWMLDIFGISISAFRCGG
GLVILLMGLTMLQGRTSSVQQESLTHNERRSKIFVPIAMPLVAGPGAITTVITIALAEPYWKNLSVALTAIVVLTMVLWV
VLLLSQGVQGLLSPLGQKILLRFFGLILVAIGVQFILAGAYEFFTDAIAQQALR

Sequences:

>Translated_214_residues
MINPMDQYIQAIVALLAIANPLSAVPVFLQAVDGLDRTQRRKSALLAAISVFTILFVAAVAGNWMLDIFGISISAFRCGG
GLVILLMGLTMLQGRTSSVQQESLTHNERRSKIFVPIAMPLVAGPGAITTVITIALAEPYWKNLSVALTAIVVLTMVLWV
VLLLSQGVQGLLSPLGQKILLRFFGLILVAIGVQFILAGAYEFFTDAIAQQALR
>Mature_214_residues
MINPMDQYIQAIVALLAIANPLSAVPVFLQAVDGLDRTQRRKSALLAAISVFTILFVAAVAGNWMLDIFGISISAFRCGG
GLVILLMGLTMLQGRTSSVQQESLTHNERRSKIFVPIAMPLVAGPGAITTVITIALAEPYWKNLSVALTAIVVLTMVLWV
VLLLSQGVQGLLSPLGQKILLRFFGLILVAIGVQFILAGAYEFFTDAIAQQALR

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=195, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=31.8181818181818, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22978; Mature: 22978

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPMDQYIQAIVALLAIANPLSAVPVFLQAVDGLDRTQRRKSALLAAISVFTILFVAAV
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNWMLDIFGISISAFRCGGGLVILLMGLTMLQGRTSSVQQESLTHNERRSKIFVPIAMP
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEHHH
LVAGPGAITTVITIALAEPYWKNLSVALTAIVVLTMVLWVVLLLSQGVQGLLSPLGQKIL
HHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LRFFGLILVAIGVQFILAGAYEFFTDAIAQQALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINPMDQYIQAIVALLAIANPLSAVPVFLQAVDGLDRTQRRKSALLAAISVFTILFVAAV
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNWMLDIFGISISAFRCGGGLVILLMGLTMLQGRTSSVQQESLTHNERRSKIFVPIAMP
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEHHH
LVAGPGAITTVITIALAEPYWKNLSVALTAIVVLTMVLWVVLLLSQGVQGLLSPLGQKIL
HHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LRFFGLILVAIGVQFILAGAYEFFTDAIAQQALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]