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The map label for this gene is yafS [H]

Identifier: 114332142

GI number: 114332142

Start: 2306544

End: 2307251

Strand: Reverse

Name: yafS [H]

Synonym: Neut_2177

Alternate gene names: 114332142

Gene position: 2307251-2306544 (Counterclockwise)

Preceding gene: 114332144

Following gene: 114332141

Centisome position: 86.7

GC content: 50.14

Gene sequence:

>708_bases
ATGCAACAGTGGTTGGAAACTGCATTAGGACAGTACGTGCTGGAGCAGGAGCAGCGTTATTTCGATCGTGTTGTGGCGGA
TATTTTCGGCTATAACGCGGCCCAGATTGGCTTTGCCGGATTTGATTTTTTGCGGAACAACCGGATGCCTTTCAAGTTTG
TGCTCGGTGTGGAAAAAGGAGCTTCAGCCAGTGCGCACCCTGCTTTTCTACCGATCAGGAGCAATAGTCTGGATCTGGTG
CTATTGCCGCACACATTGGAATTTAATTCATATCCTCTCCAGATTTTTCATGAAGTACAGCGGGTGTTGATTGATGAGGG
CAGGGTCATCATCAGCGGATTCAATCCTTTCAGTCTCTGGGGGATACGCTGGCGGATGACAAAATCTGGGATGGATTTTC
CGTGGCGCGGTCGTTTTATTGATTTGTCGCGTGTGAAGGACTGGTTGGAATTGCTTGATTTTGAAATCGTTGCCGGGCAG
TTTGGCTGTTATGTTCCGCCGTTTACCGGGGAAAAGTGGCTTTCCCGGTTGCGTTTTATGGAGGCAGCCGGAGATCGCTG
GTGGCCTGTTGCCGGGGGGGTATATTTTTTGCAGGCGGTCAAGCATGAATGTGGTATGCACATCATCAAGCCTCGCTGGG
AAAATCCATCTGTAAGCAAAAGGAGAGCGGCAGTCGTTCCACAAATAGGGCTCGGGGGAGAGAGATAA

Upstream 100 bases:

>100_bases
AAAACATCGATCATTTTTTTTCCTTACAGTAAATGACAAGCGAATCATCATCATAACTAATCATTCTGACAATATGTTTG
ATTCTGCATTGCAGCAAAAT

Downstream 100 bases:

>100_bases
TCTCTGGAATTGCGGGCTGTTGCGAAAAGAGTGGATGGGTTGATAACAGGAATAAGTGTATGCAACTGAAAAGTGATATG
AAACGAGTGGAAATTTTTAC

Product: generic methyl-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQQWLETALGQYVLEQEQRYFDRVVADIFGYNAAQIGFAGFDFLRNNRMPFKFVLGVEKGASASAHPAFLPIRSNSLDLV
LLPHTLEFNSYPLQIFHEVQRVLIDEGRVIISGFNPFSLWGIRWRMTKSGMDFPWRGRFIDLSRVKDWLELLDFEIVAGQ
FGCYVPPFTGEKWLSRLRFMEAAGDRWWPVAGGVYFLQAVKHECGMHIIKPRWENPSVSKRRAAVVPQIGLGGER

Sequences:

>Translated_235_residues
MQQWLETALGQYVLEQEQRYFDRVVADIFGYNAAQIGFAGFDFLRNNRMPFKFVLGVEKGASASAHPAFLPIRSNSLDLV
LLPHTLEFNSYPLQIFHEVQRVLIDEGRVIISGFNPFSLWGIRWRMTKSGMDFPWRGRFIDLSRVKDWLELLDFEIVAGQ
FGCYVPPFTGEKWLSRLRFMEAAGDRWWPVAGGVYFLQAVKHECGMHIIKPRWENPSVSKRRAAVVPQIGLGGER
>Mature_235_residues
MQQWLETALGQYVLEQEQRYFDRVVADIFGYNAAQIGFAGFDFLRNNRMPFKFVLGVEKGASASAHPAFLPIRSNSLDLV
LLPHTLEFNSYPLQIFHEVQRVLIDEGRVIISGFNPFSLWGIRWRMTKSGMDFPWRGRFIDLSRVKDWLELLDFEIVAGQ
FGCYVPPFTGEKWLSRLRFMEAAGDRWWPVAGGVYFLQAVKHECGMHIIKPRWENPSVSKRRAAVVPQIGLGGER

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=93, Percent_Identity=41.9354838709677, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27101; Mature: 27101

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQWLETALGQYVLEQEQRYFDRVVADIFGYNAAQIGFAGFDFLRNNRMPFKFVLGVEKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHCCCCCEEEEEEECCC
ASASAHPAFLPIRSNSLDLVLLPHTLEFNSYPLQIFHEVQRVLIDEGRVIISGFNPFSLW
CCCCCCCEEEEEECCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEE
GIRWRMTKSGMDFPWRGRFIDLSRVKDWLELLDFEIVAGQFGCYVPPFTGEKWLSRLRFM
EEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHH
EAAGDRWWPVAGGVYFLQAVKHECGMHIIKPRWENPSVSKRRAAVVPQIGLGGER
HHCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQQWLETALGQYVLEQEQRYFDRVVADIFGYNAAQIGFAGFDFLRNNRMPFKFVLGVEKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHCCCCCEEEEEEECCC
ASASAHPAFLPIRSNSLDLVLLPHTLEFNSYPLQIFHEVQRVLIDEGRVIISGFNPFSLW
CCCCCCCEEEEEECCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEE
GIRWRMTKSGMDFPWRGRFIDLSRVKDWLELLDFEIVAGQFGCYVPPFTGEKWLSRLRFM
EEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHH
EAAGDRWWPVAGGVYFLQAVKHECGMHIIKPRWENPSVSKRRAAVVPQIGLGGER
HHCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]