Click here to switch to the map view.

The map label for this gene is capM [H]

Identifier: 114332077

GI number: 114332077

Start: 2235004

End: 2236176

Strand: Reverse

Name: capM [H]

Synonym: Neut_2112

Alternate gene names: 114332077

Gene position: 2236176-2235004 (Counterclockwise)

Preceding gene: 114332078

Following gene: 114332074

Centisome position: 84.03

GC content: 48.76

Gene sequence:

>1173_bases
ATGTGGTTCTGGAATAAAAATTTTACCGGTATCAGGTATAGCGCAGGAAATGCAATCGCATTGAACAAAAAAATCATTAT
TACACTCAATACTGCGTGGAATCTGGTGAATTTCCGTGCTGGTCTCATTCGTGCCATGGTTGCTGCGGGGTATGAGGTGG
TGGCAGTTGCACCACCGGATAATTATGCACCACGTCTGGCAGAATTGGGTTGTCGTTATGTACCTTTGTCGATGGATAAC
AAGGGTACGCATCCCGGGCGGGATCTGTTGCTGTTCTGGCGTTTTCTGCGGCTAATGCACAAGGAAAGGCCAGCTGCTTA
TCTGGGGTATACGGTCAAGCCGAACATTTATGGTTCGCTGGCTGCGCACTTGTTGGCTGTTCCGGTTATCAACAATATCG
CCGGTCTGGGGTCGGTATTCATCCGGGAAGGCTGGTTGACCCGACTGGTACGGGGATTATATCGTCTGGCGTTATCGCGT
TCGGTAAAGATATTTTTCCAAAACGATGAGGACAGGGCGTTGTTTGTTTCAGGAAAATTGGTATCTGATGCAATTACTGA
TCGTCTACCAGGTTCTGGGATCGATCTCGACCACTTTGTACCCATATCCTTACCCAATAAAAAAACCTTACGTTTTCTGT
TGATTGCGCGCATGCTGTGGGACAAGGGCGTAGGAGAGTTTGTTGAGGCAGCACGCGTATTGAAGGGACAGGGATTGAAT
GCAGAATTTTGTCTGCTGGGCTTTCTGGATGTACAGAATCCGGCTGCTATTTCCCGTTCGCAGATGGATGAATGGGTGGA
GGAGGGTGTCATCCGCTATCTGGGGGCGAGTGATAACGTGGCGGAAGAAATTGCGCTGGCTGATTGTGTTGTCCTGCCCT
CCTACCGTGAGGGTGTTCCACGCACCTTGCTGGAAGCGGCTGCAATGGCGCGACCGCTTGTGACAACAGATTCTGTTGGT
TGCCGTGATGTCGTGGATGATGGCATCAATGGTTATTTATGCCAGCCGCGAGATGCAGCGGATCTTGCTAATAAAATCTC
TAAAATAGTTGCTTTATCTCACGCTGAGCGTACAGCCATGGGGTTGCGGGGCAGAAAAAAAATGGAACAGGAATTTGATG
AGCGGATTGTGATTGACAAATATCTGTTAGCGATTAAGAAAGTATTGCGCTAG

Upstream 100 bases:

>100_bases
GAGGTTGCCTGGCAGGCGCGCTGTGCTGCTGCCCGGCAGCAGGTAGAAGCTCATTTTAGTCTGGAGCGCATGGTCGAGAG
CTACCACCTCGCGTGGAAGA

Downstream 100 bases:

>100_bases
GGATAGTGTAATCAGAAGATATTTACCCAAAGAGCAATACATCTAATTTGCACAGTTGCGAGAAAAAAAGAAGTATTTTT
AGCATATTTTGTGGCAATCC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MWFWNKNFTGIRYSAGNAIALNKKIIITLNTAWNLVNFRAGLIRAMVAAGYEVVAVAPPDNYAPRLAELGCRYVPLSMDN
KGTHPGRDLLLFWRFLRLMHKERPAAYLGYTVKPNIYGSLAAHLLAVPVINNIAGLGSVFIREGWLTRLVRGLYRLALSR
SVKIFFQNDEDRALFVSGKLVSDAITDRLPGSGIDLDHFVPISLPNKKTLRFLLIARMLWDKGVGEFVEAARVLKGQGLN
AEFCLLGFLDVQNPAAISRSQMDEWVEEGVIRYLGASDNVAEEIALADCVVLPSYREGVPRTLLEAAAMARPLVTTDSVG
CRDVVDDGINGYLCQPRDAADLANKISKIVALSHAERTAMGLRGRKKMEQEFDERIVIDKYLLAIKKVLR

Sequences:

>Translated_390_residues
MWFWNKNFTGIRYSAGNAIALNKKIIITLNTAWNLVNFRAGLIRAMVAAGYEVVAVAPPDNYAPRLAELGCRYVPLSMDN
KGTHPGRDLLLFWRFLRLMHKERPAAYLGYTVKPNIYGSLAAHLLAVPVINNIAGLGSVFIREGWLTRLVRGLYRLALSR
SVKIFFQNDEDRALFVSGKLVSDAITDRLPGSGIDLDHFVPISLPNKKTLRFLLIARMLWDKGVGEFVEAARVLKGQGLN
AEFCLLGFLDVQNPAAISRSQMDEWVEEGVIRYLGASDNVAEEIALADCVVLPSYREGVPRTLLEAAAMARPLVTTDSVG
CRDVVDDGINGYLCQPRDAADLANKISKIVALSHAERTAMGLRGRKKMEQEFDERIVIDKYLLAIKKVLR
>Mature_390_residues
MWFWNKNFTGIRYSAGNAIALNKKIIITLNTAWNLVNFRAGLIRAMVAAGYEVVAVAPPDNYAPRLAELGCRYVPLSMDN
KGTHPGRDLLLFWRFLRLMHKERPAAYLGYTVKPNIYGSLAAHLLAVPVINNIAGLGSVFIREGWLTRLVRGLYRLALSR
SVKIFFQNDEDRALFVSGKLVSDAITDRLPGSGIDLDHFVPISLPNKKTLRFLLIARMLWDKGVGEFVEAARVLKGQGLN
AEFCLLGFLDVQNPAAISRSQMDEWVEEGVIRYLGASDNVAEEIALADCVVLPSYREGVPRTLLEAAAMARPLVTTDSVG
CRDVVDDGINGYLCQPRDAADLANKISKIVALSHAERTAMGLRGRKKMEQEFDERIVIDKYLLAIKKVLR

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=194, Percent_Identity=28.3505154639175, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43389; Mature: 43389

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFWNKNFTGIRYSAGNAIALNKKIIITLNTAWNLVNFRAGLIRAMVAAGYEVVAVAPPD
CCEECCCCCEEEEECCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCC
NYAPRLAELGCRYVPLSMDNKGTHPGRDLLLFWRFLRLMHKERPAAYLGYTVKPNIYGSL
CCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AAHLLAVPVINNIAGLGSVFIREGWLTRLVRGLYRLALSRSVKIFFQNDEDRALFVSGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCH
VSDAITDRLPGSGIDLDHFVPISLPNKKTLRFLLIARMLWDKGVGEFVEAARVLKGQGLN
HHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
AEFCLLGFLDVQNPAAISRSQMDEWVEEGVIRYLGASDNVAEEIALADCVVLPSYREGVP
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCHHHCCCC
RTLLEAAAMARPLVTTDSVGCRDVVDDGINGYLCQPRDAADLANKISKIVALSHAERTAM
HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GLRGRKKMEQEFDERIVIDKYLLAIKKVLR
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MWFWNKNFTGIRYSAGNAIALNKKIIITLNTAWNLVNFRAGLIRAMVAAGYEVVAVAPPD
CCEECCCCCEEEEECCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCC
NYAPRLAELGCRYVPLSMDNKGTHPGRDLLLFWRFLRLMHKERPAAYLGYTVKPNIYGSL
CCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AAHLLAVPVINNIAGLGSVFIREGWLTRLVRGLYRLALSRSVKIFFQNDEDRALFVSGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCH
VSDAITDRLPGSGIDLDHFVPISLPNKKTLRFLLIARMLWDKGVGEFVEAARVLKGQGLN
HHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
AEFCLLGFLDVQNPAAISRSQMDEWVEEGVIRYLGASDNVAEEIALADCVVLPSYREGVP
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCHHHCCCC
RTLLEAAAMARPLVTTDSVGCRDVVDDGINGYLCQPRDAADLANKISKIVALSHAERTAM
HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GLRGRKKMEQEFDERIVIDKYLLAIKKVLR
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]