| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114331829
Identifier: 114331829
GI number: 114331829
Start: 1962761
End: 1964239
Strand: Reverse
Name: 114331829
Synonym: Neut_1854
Alternate gene names: NA
Gene position: 1964239-1962761 (Counterclockwise)
Preceding gene: 114331830
Following gene: 114331828
Centisome position: 73.81
GC content: 51.05
Gene sequence:
>1479_bases GTGGTTCCGGAAGATAAACGCACAGATAACGTCTTTTTCTCTTGTGGCGCATGCCATACCGGCCGGGTCTACGTTAAAGA TCGTATCCGCCATTTAATCGGTGCACCTAATACCGAAATCGAGTCGTCAGGATACGTTGGCCTGCTCTACGGTACGGCCA AGAAACTCATTAAAGTGGACAGCCCTGACCCAGGCAAAATTCAGGTTGATTTTGATCAGGTTAGCAGAATTGCTGCATTC CTTAAAAACAGGATTGAGACTGACCCGGCCTGGTTTTACGGTGGTAAAACGCCTGAGGAGCGGTTAGCCAGTGCTGAGTA CGCCAAGGTTCAGGTTACGCGTGTATTGGGTAACCTCGAAGAGGCAGTCAAGTTTCTGATTGGCCTGGCCAAGACAACGG AGCTTATGTATCTGGCCCAGGCCTCGAATCTGATGCACACGGATAAAGAGGGACAAAAAGCACCAAGTGCATTTGGTCCA ACTCCCGGGCGCATGGATGCGTTTGGCACCGCTACTGGACTGGTCGCGGTGCATGCCAGACGTGACAGCTACCTGGCGCG TTTGCCGGATGATCATCCTTTCTTTGCAGGACTAGAAAATCTCCCACGGGAAGAACGTCTTAAAAAGGCCGGTGAGCGAC TGTTTAATACGGCAAATGAATGGATATCTCATCTTCCAGGCATTTCCGATATCAAGAGTCTGTGGTATTCACGTGACCAT GGCCTGGCTAACTGGGATGCGAATCAGGCAGCCGAGGCACGGGTACTCGCCTCAGGGGTTTCCTCGGGAGGTGATCCATC TAAAGTAAATGTCCGCATCCATGAGGCAATGAATCCGTTTATCAATGATTTGCCACCTTCTCCTTACCCCTTTTCCGTGG ATCTTGATCTGGCGGCCAAAGGCAAACCTCTTTTCGAACAGCAGTGCGCTTCTGCATGTCATTATTCTCAGAATAAGAAG GTTTATAACATCGGCACTGATATGAACCGGGCAATGCAGATCACGCCGACGGCTCGTCTGGGATTGCTTGAATTGATCCG TGAGACTTGTGAACTTTACGTTGAACGGGGTGGCAGTGATTGGTGTCGTCCCAAACGAGGCAGTCGCGCAGCCGATGACG AGGCGTATTTCGTCACGCCGCGCGGTGAGGCATCGGGTTACAAGCCGGATGTGCTTCATGGTATCTGGGCTCAGGCACCT TATCTTCACAACGGCTCTGTACCAACTTTGTGGCATCTCTTGCGGCCTGCTGAACGGCCGGTGAAATTTATTCGCGGCAA TATCAAATATGATGAAGAAAAAATTGGCTTTGTATGGGACAAGGCTCCTGCGCTTGATGAATACAGCCCTGGCGATGCTG TGCACTTTGCCGAGCATGATACAACAGTGCACGGTAATTCAAATGTCGGTCATGCCTACGGCAGCGAGTGGACAGACGAA CAGGCGTGGGCAGTCATTGAGTACATGAAAACGTTGTAG
Upstream 100 bases:
>100_bases TTTGATCCATTCCAGCACACCGTGGGACTAAACAGGTAAGCTGCTTCCGCCAGAACAACGCCATCCTTTGCCTTATGGGT TTTTCACGGCACAGGATCCG
Downstream 100 bases:
>100_bases AAAGGGGAGGCGATATGGCCAGGCAAAATGGGATGACAATAAAGGATCAGCTTTATGGCATGGTTTGCGGTTTCATCAAG CTAATCCAAATGACATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MVPEDKRTDNVFFSCGACHTGRVYVKDRIRHLIGAPNTEIESSGYVGLLYGTAKKLIKVDSPDPGKIQVDFDQVSRIAAF LKNRIETDPAWFYGGKTPEERLASAEYAKVQVTRVLGNLEEAVKFLIGLAKTTELMYLAQASNLMHTDKEGQKAPSAFGP TPGRMDAFGTATGLVAVHARRDSYLARLPDDHPFFAGLENLPREERLKKAGERLFNTANEWISHLPGISDIKSLWYSRDH GLANWDANQAAEARVLASGVSSGGDPSKVNVRIHEAMNPFINDLPPSPYPFSVDLDLAAKGKPLFEQQCASACHYSQNKK VYNIGTDMNRAMQITPTARLGLLELIRETCELYVERGGSDWCRPKRGSRAADDEAYFVTPRGEASGYKPDVLHGIWAQAP YLHNGSVPTLWHLLRPAERPVKFIRGNIKYDEEKIGFVWDKAPALDEYSPGDAVHFAEHDTTVHGNSNVGHAYGSEWTDE QAWAVIEYMKTL
Sequences:
>Translated_492_residues MVPEDKRTDNVFFSCGACHTGRVYVKDRIRHLIGAPNTEIESSGYVGLLYGTAKKLIKVDSPDPGKIQVDFDQVSRIAAF LKNRIETDPAWFYGGKTPEERLASAEYAKVQVTRVLGNLEEAVKFLIGLAKTTELMYLAQASNLMHTDKEGQKAPSAFGP TPGRMDAFGTATGLVAVHARRDSYLARLPDDHPFFAGLENLPREERLKKAGERLFNTANEWISHLPGISDIKSLWYSRDH GLANWDANQAAEARVLASGVSSGGDPSKVNVRIHEAMNPFINDLPPSPYPFSVDLDLAAKGKPLFEQQCASACHYSQNKK VYNIGTDMNRAMQITPTARLGLLELIRETCELYVERGGSDWCRPKRGSRAADDEAYFVTPRGEASGYKPDVLHGIWAQAP YLHNGSVPTLWHLLRPAERPVKFIRGNIKYDEEKIGFVWDKAPALDEYSPGDAVHFAEHDTTVHGNSNVGHAYGSEWTDE QAWAVIEYMKTL >Mature_492_residues MVPEDKRTDNVFFSCGACHTGRVYVKDRIRHLIGAPNTEIESSGYVGLLYGTAKKLIKVDSPDPGKIQVDFDQVSRIAAF LKNRIETDPAWFYGGKTPEERLASAEYAKVQVTRVLGNLEEAVKFLIGLAKTTELMYLAQASNLMHTDKEGQKAPSAFGP TPGRMDAFGTATGLVAVHARRDSYLARLPDDHPFFAGLENLPREERLKKAGERLFNTANEWISHLPGISDIKSLWYSRDH GLANWDANQAAEARVLASGVSSGGDPSKVNVRIHEAMNPFINDLPPSPYPFSVDLDLAAKGKPLFEQQCASACHYSQNKK VYNIGTDMNRAMQITPTARLGLLELIRETCELYVERGGSDWCRPKRGSRAADDEAYFVTPRGEASGYKPDVLHGIWAQAP YLHNGSVPTLWHLLRPAERPVKFIRGNIKYDEEKIGFVWDKAPALDEYSPGDAVHFAEHDTTVHGNSNVGHAYGSEWTDE QAWAVIEYMKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54693; Mature: 54693
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPEDKRTDNVFFSCGACHTGRVYVKDRIRHLIGAPNTEIESSGYVGLLYGTAKKLIKVD CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHEECC SPDPGKIQVDFDQVSRIAAFLKNRIETDPAWFYGGKTPEERLASAEYAKVQVTRVLGNLE CCCCCEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHH EAVKFLIGLAKTTELMYLAQASNLMHTDKEGQKAPSAFGPTPGRMDAFGTATGLVAVHAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEC RDSYLARLPDDHPFFAGLENLPREERLKKAGERLFNTANEWISHLPGISDIKSLWYSRDH CCCHHHCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC GLANWDANQAAEARVLASGVSSGGDPSKVNVRIHEAMNPFINDLPPSPYPFSVDLDLAAK CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHHHHCCCCCCCCEEEEEEECCC GKPLFEQQCASACHYSQNKKVYNIGTDMNRAMQITPTARLGLLELIRETCELYVERGGSD CCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCC WCRPKRGSRAADDEAYFVTPRGEASGYKPDVLHGIWAQAPYLHNGSVPTLWHLLRPAERP CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH VKFIRGNIKYDEEKIGFVWDKAPALDEYSPGDAVHFAEHDTTVHGNSNVGHAYGSEWTDE HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCH QAWAVIEYMKTL HHHHHHHHHHHC >Mature Secondary Structure MVPEDKRTDNVFFSCGACHTGRVYVKDRIRHLIGAPNTEIESSGYVGLLYGTAKKLIKVD CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHEECC SPDPGKIQVDFDQVSRIAAFLKNRIETDPAWFYGGKTPEERLASAEYAKVQVTRVLGNLE CCCCCEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHH EAVKFLIGLAKTTELMYLAQASNLMHTDKEGQKAPSAFGPTPGRMDAFGTATGLVAVHAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEC RDSYLARLPDDHPFFAGLENLPREERLKKAGERLFNTANEWISHLPGISDIKSLWYSRDH CCCHHHCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC GLANWDANQAAEARVLASGVSSGGDPSKVNVRIHEAMNPFINDLPPSPYPFSVDLDLAAK CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHHHHCCCCCCCCEEEEEEECCC GKPLFEQQCASACHYSQNKKVYNIGTDMNRAMQITPTARLGLLELIRETCELYVERGGSD CCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCC WCRPKRGSRAADDEAYFVTPRGEASGYKPDVLHGIWAQAPYLHNGSVPTLWHLLRPAERP CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH VKFIRGNIKYDEEKIGFVWDKAPALDEYSPGDAVHFAEHDTTVHGNSNVGHAYGSEWTDE HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCH QAWAVIEYMKTL HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]