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The map label for this gene is ppdD [C]

Identifier: 114331813

GI number: 114331813

Start: 1947001

End: 1947558

Strand: Reverse

Name: ppdD [C]

Synonym: Neut_1837

Alternate gene names: 114331813

Gene position: 1947558-1947001 (Counterclockwise)

Preceding gene: 114331815

Following gene: 114331812

Centisome position: 73.19

GC content: 46.42

Gene sequence:

>558_bases
ATGACTGTATCTATCAGCAAGGGTTTTACCATGGTTGAGCTGATGATCACTATCAGTATTGCCTCCATCCTGCTTGCCGT
GGCTGTTCCAGGCTACCAATCCCTGATGCGGGAATCGCGCTTGACCGCACAAGCCAATGAACTGATGACTGCGCTGCACT
ATGCCCGTTCTGAAGCAGTGAAGCGGGGAGGGAGAATCACCATCTGCAAAAGCCCGGATGGTGCAACTTGTAATGACGGT
AGCTGGCAGGATGGCTGGCTGGTTTTTAGCGATGCGGGTACGGCTGGTGCTGTCGATAGTGACGATGAAATATTGAGAGT
CTTCCCAAAATTGAATGGAAGCTCATTGAAAGGTGGGGGTAATTTTAGTAGCAGAATTTCATATTTGCGTAATGGGCGTA
GTCAAGGTAATAACAATCTGCCAAATGGAACATTTACCTTATGTAATCAGAATGATGCACGCAAAATTGTGATTAATGTT
TCTGGTCGGGCAAGAGTAGAAAAAGCGGGATGTCCGTCAAACAAGGAGTTTCTCGATGAGAGTAAAAATGATGGCTAA

Upstream 100 bases:

>100_bases
GCAATGTAACCGGAAGAAATACAGCGATCGGGTTCATTTTTTCACTGGGGCACTAATCCGGTCAGGATCACAAAACAGTT
TTATCTATGGAAACAATGAA

Downstream 100 bases:

>100_bases
GCAGAATTCTTCTTCTGTGCATGCTCAAGCTGGTGCCGGCATGATCGAAGTGCTGGTGGCCATCATTGTTCTTTCGATTG
GACTGCTTGGGCTGGCAGGG

Product: fimbrial pilin related signal peptide protein

Products: NA

Alternate protein names: Type-4 Fimbrial Pilin Related Signal Peptide Protein; Pre-Pilin Like Leader Sequence; Tfp Pilus Assembly Protein FimT; Type IV Pilus Assembly Protein FimT; Methylation Site Containing Protein; Methylation; Fimbrial Biogenesis Protein; Fimbrial Pilin Related Signal Peptide Protein; Type IV Pilus Assembly Protein Fimt; Prokaryotic N-Terminal Methylation Motif Domain Protein; Tfp Pilus Assembly Protein FimT-Like Protein; General Secretion Pathway Protein H; Pilus Assembly Protein; TypeIV Fimbrial FimT-Related Pilin; Type IV Pilin; Pilus Assambly Protein; N-Terminal Methylation Site; Type 4 Fimbrial Pilin Related Transmembrane Protein; Type IV Prepilin; Fimbrial Protein FimT; N-Terminal Methylation Site-Containing Protein; FimT Protein; Type 4 Fimbrial Biogenesis Protein FimU; Type IV Pre-Pilin; Prepilin-Type Cleavage/Methylation-Like Protein; Type IV Pilus Biogenesis Protein FimT; Tfp Pilus Assembly Protein; FimT Type IV Pilus Assembly Protein; Fimbrial Protein Pilin; Type IV Fimbrial Fimt-Related Pilin; Type-4 Fimbrial Pilin Related Protein; Fimbrial Protein FIMU

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTVSISKGFTMVELMITISIASILLAVAVPGYQSLMRESRLTAQANELMTALHYARSEAVKRGGRITICKSPDGATCNDG
SWQDGWLVFSDAGTAGAVDSDDEILRVFPKLNGSSLKGGGNFSSRISYLRNGRSQGNNNLPNGTFTLCNQNDARKIVINV
SGRARVEKAGCPSNKEFLDESKNDG

Sequences:

>Translated_185_residues
MTVSISKGFTMVELMITISIASILLAVAVPGYQSLMRESRLTAQANELMTALHYARSEAVKRGGRITICKSPDGATCNDG
SWQDGWLVFSDAGTAGAVDSDDEILRVFPKLNGSSLKGGGNFSSRISYLRNGRSQGNNNLPNGTFTLCNQNDARKIVINV
SGRARVEKAGCPSNKEFLDESKNDG
>Mature_184_residues
TVSISKGFTMVELMITISIASILLAVAVPGYQSLMRESRLTAQANELMTALHYARSEAVKRGGRITICKSPDGATCNDGS
WQDGWLVFSDAGTAGAVDSDDEILRVFPKLNGSSLKGGGNFSSRISYLRNGRSQGNNNLPNGTFTLCNQNDARKIVINVS
GRARVEKAGCPSNKEFLDESKNDG

Specific function: Not Yet Known. [C]

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19840; Mature: 19708

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSISKGFTMVELMITISIASILLAVAVPGYQSLMRESRLTAQANELMTALHYARSEAV
CEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGGRITICKSPDGATCNDGSWQDGWLVFSDAGTAGAVDSDDEILRVFPKLNGSSLKGGG
HCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEECCCCCCCCCCCC
NFSSRISYLRNGRSQGNNNLPNGTFTLCNQNDARKIVINVSGRARVEKAGCPSNKEFLDE
CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEECCCCCCCHHHHCC
SKNDG
CCCCC
>Mature Secondary Structure 
TVSISKGFTMVELMITISIASILLAVAVPGYQSLMRESRLTAQANELMTALHYARSEAV
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGGRITICKSPDGATCNDGSWQDGWLVFSDAGTAGAVDSDDEILRVFPKLNGSSLKGGG
HCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEECCCCCCCCCCCC
NFSSRISYLRNGRSQGNNNLPNGTFTLCNQNDARKIVINVSGRARVEKAGCPSNKEFLDE
CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEECCCCCCCHHHHCC
SKNDG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA