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The map label for this gene is ycaP [C]

Identifier: 114331312

GI number: 114331312

Start: 1383417

End: 1383893

Strand: Direct

Name: ycaP [C]

Synonym: Neut_1319

Alternate gene names: 114331312

Gene position: 1383417-1383893 (Clockwise)

Preceding gene: 114331311

Following gene: 114331316

Centisome position: 51.99

GC content: 34.17

Gene sequence:

>477_bases
ATGGATTTAGAGATTTTTAATTTTAGCGTTTCACCTTGGGAAATTCTGATTAGAGGATCTTTAATGTACTGGGCTCTTTT
CATTATTTTTAGATTTATTCTACGTAGAAACGTCGGCGCAATGGAAGTAAGTGATGTTCTTTTCATAGTCATCGTATCTG
ATGCTGCTCAAAACGCCATGAGTGGTAGTGCGACCAATATTGCAGATGGATTACTATTAGTAAGTACCTTAGTATTCTGG
AATCTTCTACTCGACTACTTGAGTTTCAGATTTTTATTTCTCAGAAAATTTATCGTTTCACCTCCTATAATTCTTATTAA
CGATGGCGTTTTGCAATGGAAAAATATGAGAAAACAATTTATTACCAAAGATGAATTGAATGCCAGAATGAGAGAAGAGG
GATTAGAAGAAATAGCTCTCGTAAAAGAGATGCGACTGGAAAGTAATGGAGAAATTAGTGTCATAAAAGCAAACTAA

Upstream 100 bases:

>100_bases
TGATCAAATCAATTGCACGGAGTCAATGCACATCAATTAAACGTAGCATCAATTTTCTAATATAAATTACTTGACTGATT
GACGACCTGGAGATTTACAT

Downstream 100 bases:

>100_bases
GAAAAAAATGATTTTGGTTCGTTCTGTACTTTGACGTTTACAATGAAATTCGAGGGTATTGCAATAAAATCATCTCTTCT
CTCAAAACAGCTAGTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDLEIFNFSVSPWEILIRGSLMYWALFIIFRFILRRNVGAMEVSDVLFIVIVSDAAQNAMSGSATNIADGLLLVSTLVFW
NLLLDYLSFRFLFLRKFIVSPPIILINDGVLQWKNMRKQFITKDELNARMREEGLEEIALVKEMRLESNGEISVIKAN

Sequences:

>Translated_158_residues
MDLEIFNFSVSPWEILIRGSLMYWALFIIFRFILRRNVGAMEVSDVLFIVIVSDAAQNAMSGSATNIADGLLLVSTLVFW
NLLLDYLSFRFLFLRKFIVSPPIILINDGVLQWKNMRKQFITKDELNARMREEGLEEIALVKEMRLESNGEISVIKAN
>Mature_158_residues
MDLEIFNFSVSPWEILIRGSLMYWALFIIFRFILRRNVGAMEVSDVLFIVIVSDAAQNAMSGSATNIADGLLLVSTLVFW
NLLLDYLSFRFLFLRKFIVSPPIILINDGVLQWKNMRKQFITKDELNARMREEGLEEIALVKEMRLESNGEISVIKAN

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18209; Mature: 18209

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEIFNFSVSPWEILIRGSLMYWALFIIFRFILRRNVGAMEVSDVLFIVIVSDAAQNAM
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHEEEEEEECHHHHHHC
SGSATNIADGLLLVSTLVFWNLLLDYLSFRFLFLRKFIVSPPIILINDGVLQWKNMRKQF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
ITKDELNARMREEGLEEIALVKEMRLESNGEISVIKAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MDLEIFNFSVSPWEILIRGSLMYWALFIIFRFILRRNVGAMEVSDVLFIVIVSDAAQNAM
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHEEEEEEECHHHHHHC
SGSATNIADGLLLVSTLVFWNLLLDYLSFRFLFLRKFIVSPPIILINDGVLQWKNMRKQF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
ITKDELNARMREEGLEEIALVKEMRLESNGEISVIKAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA