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The map label for this gene is sbcC [C]

Identifier: 114331273

GI number: 114331273

Start: 1340899

End: 1341090

Strand: Direct

Name: sbcC [C]

Synonym: Neut_1279

Alternate gene names: 114331273

Gene position: 1340899-1341090 (Clockwise)

Preceding gene: 114331266

Following gene: 114331274

Centisome position: 50.39

GC content: 51.56

Gene sequence:

>192_bases
GTGCTTGATGTTATCTGCCTGGCACTGTACGGCCGCACTCCTCGCTTCAATAAAGTTACCAAGCGCAAAAATGAAATCAT
GTCGCGACAGACGGGTGAATGTTTTACTGAAGTACTCTTTGCCACCCAGTCCGGGCACTTCCGCTGTCATTTGAGCCAGC
GCCGGGCGCGCAAAAAACTGATCTGCACTTGA

Upstream 100 bases:

>100_bases
GAAAAAAGACATACCGTGCTCACCAAGCTCTGAAATTCGGGAGTAAAAATAACCTATGTAGATTACGATTACCGGCCCAG
CCGGTGCTGGTAAAACAACT

Downstream 100 bases:

>100_bases
ACAATTTGAATTTGAACGGAAAAAACAGTAGAAAGCTATCCCGCTGATCCGCAGCTTCATCGTCAGTCTGACACGTTGGA
TGAAGAAGCACTTGATGCCG

Product: ATP-dependent dsDNA exonuclease (SbcC)

Products: 5'-phosphomonoesters [C]

Alternate protein names: SMC Domain Protein; Exonuclease SbcC; ATP-Dependent DsDNA Exonuclease; Exonuclease; ABC Transporter ATPase; ATP-Dependent DsDNA Exonuclease-Like

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MLDVICLALYGRTPRFNKVTKRKNEIMSRQTGECFTEVLFATQSGHFRCHLSQRRARKKLICT

Sequences:

>Translated_63_residues
MLDVICLALYGRTPRFNKVTKRKNEIMSRQTGECFTEVLFATQSGHFRCHLSQRRARKKLICT
>Mature_63_residues
MLDVICLALYGRTPRFNKVTKRKNEIMSRQTGECFTEVLFATQSGHFRCHLSQRRARKKLICT

Specific function: Sbccd Cleaves DNA Hairpin Structures. These Structures Can Inhibit DNA Replication And Are Intermediates In Certain DNA Recombination Reactions. The Complex Acts As A 3'->5' Double Strand Exonuclease That Can Open Hairpins. It Also Has A 5' Single-Strand

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786597, Length=59, Percent_Identity=45.7627118644068, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7390; Mature: 7390

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVICLALYGRTPRFNKVTKRKNEIMSRQTGECFTEVLFATQSGHFRCHLSQRRARKKL
CHHHHEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHCC
ICT
CCC
>Mature Secondary Structure
MLDVICLALYGRTPRFNKVTKRKNEIMSRQTGECFTEVLFATQSGHFRCHLSQRRARKKL
CHHHHEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHCC
ICT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ribo- or deoxyribonucleic acids [C]

Specific reaction: ribo- or deoxyribonucleic acids = 5'-phosphomonoesters [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA