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The map label for this gene is cheD

Identifier: 114331170

GI number: 114331170

Start: 1223267

End: 1223851

Strand: Direct

Name: cheD

Synonym: Neut_1172

Alternate gene names: 114331170

Gene position: 1223267-1223851 (Clockwise)

Preceding gene: 114331169

Following gene: 114331171

Centisome position: 45.97

GC content: 45.13

Gene sequence:

>585_bases
ATGGTTGATCCTCAGTTTGCTTCAAATTTCTATTTTGATCAGCGTTTAAATATTGATGCGGTCAAGCTGTTACCCGGGGA
GTACTTTGTAACCACCCGAGAGATGGTGTTGAGTACAGTACTGGGTTCCTGTGTTTCTGCCTGTATCTATGACCAGCAGA
GCAGGATAGGTGGCATGAATCATTTTATGCTGCCAAGCAGTGAAAATAGCAGCGGATTCCCAATTGAATGTGCACGTTTT
GGCGGTTATGCAATGGGTATCCTGATTCGGGAATTGCTTAAAAATGGTGCGCGCAAACAAAATCTGGTTGCCAAGGTATT
TGGTGGTGGCAATGTTCAACCGGCCATGGTTACTTCGGCGATTGGCTCACAAAACGCCAGATTTGTAAAAAAATATCTGG
CCGAGTACGAGATTCCCATTCTGGCGGGAGATCTGGAGGGGTTTTATCCACGCAAACTGCATTTTTTTCCCAAAAGTGGC
CGGGTATTACTAAAGAAACTGCACGTATCGCATAACGATACCATTGCCAAGCGTGAGAAACATTACAGCCGGTTACTGCT
ATCCACAGTAAAACCGGGAATATAG

Upstream 100 bases:

>100_bases
TACAAGCCGGTTATCAAATAACAACAGAGCGGAGCTAGGGGTATGCATATCTTTGCAGCAAAAACAGATCCGATGAATTG
CCACGCAACCCTATCCTGCC

Downstream 100 bases:

>100_bases
ACGAATTCTCCTGAATATTGAGGGGTACCCATGAAAAAAATCAGTGTGCTTGTTATCGATGATTCTGCCTTGATTCGTAA
ATTACTGGCCGAGATCATCA

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVDPQFASNFYFDQRLNIDAVKLLPGEYFVTTREMVLSTVLGSCVSACIYDQQSRIGGMNHFMLPSSENSSGFPIECARF
GGYAMGILIRELLKNGARKQNLVAKVFGGGNVQPAMVTSAIGSQNARFVKKYLAEYEIPILAGDLEGFYPRKLHFFPKSG
RVLLKKLHVSHNDTIAKREKHYSRLLLSTVKPGI

Sequences:

>Translated_194_residues
MVDPQFASNFYFDQRLNIDAVKLLPGEYFVTTREMVLSTVLGSCVSACIYDQQSRIGGMNHFMLPSSENSSGFPIECARF
GGYAMGILIRELLKNGARKQNLVAKVFGGGNVQPAMVTSAIGSQNARFVKKYLAEYEIPILAGDLEGFYPRKLHFFPKSG
RVLLKKLHVSHNDTIAKREKHYSRLLLSTVKPGI
>Mature_194_residues
MVDPQFASNFYFDQRLNIDAVKLLPGEYFVTTREMVLSTVLGSCVSACIYDQQSRIGGMNHFMLPSSENSSGFPIECARF
GGYAMGILIRELLKNGARKQNLVAKVFGGGNVQPAMVTSAIGSQNARFVKKYLAEYEIPILAGDLEGFYPRKLHFFPKSG
RVLLKKLHVSHNDTIAKREKHYSRLLLSTVKPGI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_NITEC (Q0AGV5)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747392.1
- ProteinModelPortal:   Q0AGV5
- SMR:   Q0AGV5
- STRING:   Q0AGV5
- GeneID:   4274087
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_1172
- NMPDR:   fig|335283.3.peg.945
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   PRKVYFF
- ProtClustDB:   PRK13487
- BioCyc:   NEUT335283:NEUT_1172-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 21609; Mature: 21609

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDPQFASNFYFDQRLNIDAVKLLPGEYFVTTREMVLSTVLGSCVSACIYDQQSRIGGMN
CCCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFMLPSSENSSGFPIECARFGGYAMGILIRELLKNGARKQNLVAKVFGGGNVQPAMVTSA
EEECCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCHHHHHHH
IGSQNARFVKKYLAEYEIPILAGDLEGFYPRKLHFFPKSGRVLLKKLHVSHNDTIAKREK
HCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHH
HYSRLLLSTVKPGI
HHHHHHHHHCCCCC
>Mature Secondary Structure
MVDPQFASNFYFDQRLNIDAVKLLPGEYFVTTREMVLSTVLGSCVSACIYDQQSRIGGMN
CCCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFMLPSSENSSGFPIECARFGGYAMGILIRELLKNGARKQNLVAKVFGGGNVQPAMVTSA
EEECCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCHHHHHHH
IGSQNARFVKKYLAEYEIPILAGDLEGFYPRKLHFFPKSGRVLLKKLHVSHNDTIAKREK
HCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHH
HYSRLLLSTVKPGI
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA