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The map label for this gene is lptF [H]

Identifier: 114331100

GI number: 114331100

Start: 1141791

End: 1142864

Strand: Direct

Name: lptF [H]

Synonym: Neut_1102

Alternate gene names: 114331100

Gene position: 1141791-1142864 (Clockwise)

Preceding gene: 114331099

Following gene: 114331101

Centisome position: 42.91

GC content: 45.62

Gene sequence:

>1074_bases
ATGGGAATTATTGAAAGATATATCTCACGGGAACTATTACTTCCTTTCTTCGTAGTAACTATCATCCTGATCGGGCTTTT
CGTAAGTTTCAGCGTTGCGCGTTTTTTAACCGGGGCGGTGGCTGAGACCTTGGGTGCCATAGCCATGTTCAAACTGGTGG
GGCTGAAAACTATTATTGCGCTGGAAGTGCTGGTGCCGATTGCTTTTTATGTTGCGGTAATCCATGGTTTAAGCCGGATG
AACCGTGATCAGGAAATTAATGTGTTACGTTCTGTCGGTTATGGTGACAACCAGATTATTCGTACTGTTTTCATAATTGC
CCTACCCATTGCCGTCCTCAGTGGAGTCCTTTCCATTTATGCTCGCCCGTGGGCGTATGCAGAAAGCTATGTGATGAATG
CACAGGCTGAAGCTGAGTTAAATACTGATCGATTTCAGCCAGGAAGATTCTACGGTAGTGAGAAAAGTGGCCGTGTAATC
TTTATCCGGGGAAAAGATGATCTTGAAAAACGCATGGAAGGCATTTTTCACTACATCAGAACAGCTGAAAACAGAGAAAT
TATCGTATCCCGAGAAGGTTACCAGCAGCCCATGACACAGGAGCAATGGCCGTATATTGAATTGCTGGACGGGAAAATCT
ATCGTCTTGGATATGATGCAGCCAGGGATAGCACTGTTCAGTTTGAAAAGATGATTTACTTTAATGAAAACGATCAAGCT
CAAAACTATCGACGCAAGGCTGCATCAACGCAATCATTATGGAATTCCGAGCAACCGCAGGAGATAGCGGAATTACAATG
GCGGCTTTCCCGGCCAGCCGCAACCATTTTGCTGGCTTTGATCGCGGTTTCTTTTACCCGGACAGCGCCACGTAAAGATA
AAGCTGATAGAACATTTATTGTTGCAGCGCTAGTATTCGCTGTTTATTACAACCTCAGTGGATTAGCGAAAACCTGGGTG
GAGCAGGGCGTTGTTGCTGCCGTGCCGGGGATCTGGTGGGTATATGGATTGCTTCTCATGGTTGTTGTATTGCGCCTGCC
TGAGCTCAGGTTATTCTTATCTGCAAGAAAATAG

Upstream 100 bases:

>100_bases
CATTGATGTTGATAAAGTGGAAGATTTACAGCTGGTAAAATCTGTTCTGGCCAAAGCAATATCGACACATCCACCGGTGT
AGAACGGACAGCTGACTTTC

Downstream 100 bases:

>100_bases
TGAAGATCTGTTATCGCTACATCGCCTTGCAGGTTTTGACAGGGATGATTATTGCTACTGTGGTGCTGTTGCCCTTGTTC
AGTTTTTTTGATCTGCTTGA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIALEVLVPIAFYVAVIHGLSRM
NRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIYARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVI
FIRGKDDLEKRMEGIFHYIRTAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQA
QNYRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAPRKDKADRTFIVAALVFAVYYNLSGLAKTWV
EQGVVAAVPGIWWVYGLLLMVVVLRLPELRLFLSARK

Sequences:

>Translated_357_residues
MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIALEVLVPIAFYVAVIHGLSRM
NRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIYARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVI
FIRGKDDLEKRMEGIFHYIRTAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQA
QNYRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAPRKDKADRTFIVAALVFAVYYNLSGLAKTWV
EQGVVAAVPGIWWVYGLLLMVVVLRLPELRLFLSARK
>Mature_356_residues
GIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIALEVLVPIAFYVAVIHGLSRMN
RDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIYARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIF
IRGKDDLEKRMEGIFHYIRTAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQAQ
NYRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAPRKDKADRTFIVAALVFAVYYNLSGLAKTWVE
QGVVAAVPGIWWVYGLLLMVVVLRLPELRLFLSARK

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40609; Mature: 40478

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVLVPIAFYVAVIHGLSRMNRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGIFHYIR
HCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
TAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQA
CCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHEEEHEEEECCCCHH
QNYRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAPRKDKADRTFI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VAALVFAVYYNLSGLAKTWVEQGVVAAVPGIWWVYGLLLMVVVLRLPELRLFLSARK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
GIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVLVPIAFYVAVIHGLSRMNRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGIFHYIR
HCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
TAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQA
CCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHEEEHEEEECCCCHH
QNYRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAPRKDKADRTFI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VAALVFAVYYNLSGLAKTWVEQGVVAAVPGIWWVYGLLLMVVVLRLPELRLFLSARK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]