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The map label for this gene is 114331096

Identifier: 114331096

GI number: 114331096

Start: 1138280

End: 1138900

Strand: Reverse

Name: 114331096

Synonym: Neut_1098

Alternate gene names: NA

Gene position: 1138900-1138280 (Counterclockwise)

Preceding gene: 114331106

Following gene: 114331088

Centisome position: 42.8

GC content: 43.96

Gene sequence:

>621_bases
GTGGAGGACAAAGAAAAAAATACGTCTGAATTATTACAACTGATTGTTATACAAAATAACAATGAGATGATCACTGTCGA
TCAGATCAAACATTCTCTGGATGAACGAGGATTTGCTGTATTGCTGGCTATTGCCACCTTGCCAATTTGTCTTCCTATTC
CCGCCCCACCTGGTTTTACGACTGTTTTTGCTATTCCGCTTTTTATTTTTTCAGTACAGATGATATGCGGCATGAGGGCA
CCCTGGATTCCCCAGTGGCTGGCAAGGAAAGCAATAAGAAAAAAAACACTGGATAAACTGATCAACAAGATCACACCATG
GTTGCGAAAAATAGAAAGACACCTGCACCCGCGGCTAACCTACATCAGCGTGCATGCCTGGGAGCGAATCATTGGCCTCT
TCTCTTTTATTTTTTCAATTTCTATTGCGCTGCCCATTCCCTTGATCAATTTTTTGCCAGGCTGGGGTATTCTTATTATG
TCGCTCGGATTACTCAGCAAAGATGGCCTGACCATTTTCGCCGGCATGATCGTCGGCACCATCGGCGTTGGAATAGCTCT
GATAATCGTTGCATTGTTATGGATGGGAGTTCCGATACCATACCTGCATCCGGCTGATTAA

Upstream 100 bases:

>100_bases
GCTCGTTGCCATACGGCTGTATTACAAAAACCCGGTAGAAAAGTAATCCTGGTAACAGAAATGGCCTGAATTTTATATCG
AAACAACCAAGGAGGGAGTA

Downstream 100 bases:

>100_bases
TTCAACCTGCAGCCACTTTGCTGATCACATAGCGAAATTTGCCTGATTTCTCGGCTGAAATTTCGGATACCTGCTCTATT
TTGATTATTACACCCCGGCC

Product: exopolysaccharide synthesis, ExoD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEDKEKNTSELLQLIVIQNNNEMITVDQIKHSLDERGFAVLLAIATLPICLPIPAPPGFTTVFAIPLFIFSVQMICGMRA
PWIPQWLARKAIRKKTLDKLINKITPWLRKIERHLHPRLTYISVHAWERIIGLFSFIFSISIALPIPLINFLPGWGILIM
SLGLLSKDGLTIFAGMIVGTIGVGIALIIVALLWMGVPIPYLHPAD

Sequences:

>Translated_206_residues
MEDKEKNTSELLQLIVIQNNNEMITVDQIKHSLDERGFAVLLAIATLPICLPIPAPPGFTTVFAIPLFIFSVQMICGMRA
PWIPQWLARKAIRKKTLDKLINKITPWLRKIERHLHPRLTYISVHAWERIIGLFSFIFSISIALPIPLINFLPGWGILIM
SLGLLSKDGLTIFAGMIVGTIGVGIALIIVALLWMGVPIPYLHPAD
>Mature_206_residues
MEDKEKNTSELLQLIVIQNNNEMITVDQIKHSLDERGFAVLLAIATLPICLPIPAPPGFTTVFAIPLFIFSVQMICGMRA
PWIPQWLARKAIRKKTLDKLINKITPWLRKIERHLHPRLTYISVHAWERIIGLFSFIFSISIALPIPLINFLPGWGILIM
SLGLLSKDGLTIFAGMIVGTIGVGIALIIVALLWMGVPIPYLHPAD

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 23061; Mature: 23061

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKEKNTSELLQLIVIQNNNEMITVDQIKHSLDERGFAVLLAIATLPICLPIPAPPGFT
CCCCCCCHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
TVFAIPLFIFSVQMICGMRAPWIPQWLARKAIRKKTLDKLINKITPWLRKIERHLHPRLT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YISVHAWERIIGLFSFIFSISIALPIPLINFLPGWGILIMSLGLLSKDGLTIFAGMIVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IGVGIALIIVALLWMGVPIPYLHPAD
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEDKEKNTSELLQLIVIQNNNEMITVDQIKHSLDERGFAVLLAIATLPICLPIPAPPGFT
CCCCCCCHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
TVFAIPLFIFSVQMICGMRAPWIPQWLARKAIRKKTLDKLINKITPWLRKIERHLHPRLT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YISVHAWERIIGLFSFIFSISIALPIPLINFLPGWGILIMSLGLLSKDGLTIFAGMIVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IGVGIALIIVALLWMGVPIPYLHPAD
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]