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The map label for this gene is 114331017

Identifier: 114331017

GI number: 114331017

Start: 1047048

End: 1047962

Strand: Reverse

Name: 114331017

Synonym: Neut_1015

Alternate gene names: NA

Gene position: 1047962-1047048 (Counterclockwise)

Preceding gene: 114331018

Following gene: 114331016

Centisome position: 39.38

GC content: 49.84

Gene sequence:

>915_bases
ATGACACTGAAAAACCGCTATGACTTTGTATTGCTATTCGATGTAAAAGACGGCAACCCGAATGGCGATCCAGATGCAGG
CAATCTGCCGCGTGTCGATGCGGAAACCGGGCTGGGATTGATGACGGATGTCGCCCTGAAACGCAAAGTGCGTAACTTTG
TCAGTATGACCAGGGATCAGTCAGAAGTAACAGAATCCTTGAATGGAGACAAAAAACGCTTCGAGATTTACGTTAAAGAG
AAAGCCATTCTCAATAACCAGAACAAGCGCGCCTATGTCGGCATCGGCAAACCCGAGCTGCTGGAAGGAGAGGATAAAAA
GCGTAAAGGAGGCAATGCCGTTGAAGAAGCTCGTCAGTGGATGTGTAAAAATTTCTATGATGTACGCACGTTTGGGGCTG
TCATGTCTACTGGCATCAACTGTGGCCAAGTACGCGGCCCGGTACAACTCACCTTTGCCCGCTCTATCAATCCTATCGTG
GCGTTGGAGCATTCCATTACCCGCATGGCTGTCGCTACTGAAGTGGAAGCTGAAAAACAGTCTGGCGACAACCGTACCAT
GGGCCGCAAATTCACCGTACCGTACGGTCTCTACGTTGCCCACGGTTTTATCTCTGCCCATCTTGCCAACCAAACCGATT
TTGGTGAAGACGACCTCGAATTGCTGTGGCAGGCACTCGAAAGCATGTTCGAGCATGATCGCTCTGCTGCACGAGGTGAA
ATGGCAACCCGGGGGCTGTATGTGTTCAAACATAACAGCGAACTGGGTAACGCTCCGGCTCACAGTTTATTCGCACGCAT
TCAGCCCAAACTGAAAAATGAAAATTCCATCGTACGTGACTTTAGTGATTACACCGTTATGGTAGATGAGGCGGACTTGC
CACAGGGCGTGACATTACAGCGTATTGTTGGCTGA

Upstream 100 bases:

>100_bases
TAAATCTGGCCGATCAAGGGCGTTTTGCTATCGGATATTACCATCAACGACAAGCCTTCTTCACTAAATCCGAACCTGCT
AATAAAGGAGAATAATCACC

Downstream 100 bases:

>100_bases
TAGCAGCATGAGTGGTGAATCCGACGACCCCATCATGCTTTCCGCCCTCCAGCACTGGAGCTACTGCCCGCGCCAGTGCG
CATTGATCCATCTGGAGCAG

Product: CRISPR-associated Csd2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Csh2 Family; CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Protein; Csd2 Family CRISPR-Associated Protein; Crispr-Associated Protein; Crispr-Protein; Cytoplasmic Protein; CRISPR-Associated Protein TM; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTLKNRYDFVLLFDVKDGNPNGDPDAGNLPRVDAETGLGLMTDVALKRKVRNFVSMTRDQSEVTESLNGDKKRFEIYVKE
KAILNNQNKRAYVGIGKPELLEGEDKKRKGGNAVEEARQWMCKNFYDVRTFGAVMSTGINCGQVRGPVQLTFARSINPIV
ALEHSITRMAVATEVEAEKQSGDNRTMGRKFTVPYGLYVAHGFISAHLANQTDFGEDDLELLWQALESMFEHDRSAARGE
MATRGLYVFKHNSELGNAPAHSLFARIQPKLKNENSIVRDFSDYTVMVDEADLPQGVTLQRIVG

Sequences:

>Translated_304_residues
MTLKNRYDFVLLFDVKDGNPNGDPDAGNLPRVDAETGLGLMTDVALKRKVRNFVSMTRDQSEVTESLNGDKKRFEIYVKE
KAILNNQNKRAYVGIGKPELLEGEDKKRKGGNAVEEARQWMCKNFYDVRTFGAVMSTGINCGQVRGPVQLTFARSINPIV
ALEHSITRMAVATEVEAEKQSGDNRTMGRKFTVPYGLYVAHGFISAHLANQTDFGEDDLELLWQALESMFEHDRSAARGE
MATRGLYVFKHNSELGNAPAHSLFARIQPKLKNENSIVRDFSDYTVMVDEADLPQGVTLQRIVG
>Mature_303_residues
TLKNRYDFVLLFDVKDGNPNGDPDAGNLPRVDAETGLGLMTDVALKRKVRNFVSMTRDQSEVTESLNGDKKRFEIYVKEK
AILNNQNKRAYVGIGKPELLEGEDKKRKGGNAVEEARQWMCKNFYDVRTFGAVMSTGINCGQVRGPVQLTFARSINPIVA
LEHSITRMAVATEVEAEKQSGDNRTMGRKFTVPYGLYVAHGFISAHLANQTDFGEDDLELLWQALESMFEHDRSAARGEM
ATRGLYVFKHNSELGNAPAHSLFARIQPKLKNENSIVRDFSDYTVMVDEADLPQGVTLQRIVG

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34025; Mature: 33894

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKNRYDFVLLFDVKDGNPNGDPDAGNLPRVDAETGLGLMTDVALKRKVRNFVSMTRDQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCH
SEVTESLNGDKKRFEIYVKEKAILNNQNKRAYVGIGKPELLEGEDKKRKGGNAVEEARQW
HHHHHHHCCCCEEEEEEEEHHHHHCCCCCEEEEECCCCHHCCCCCHHCCCCCHHHHHHHH
MCKNFYDVRTFGAVMSTGINCGQVRGPVQLTFARSINPIVALEHSITRMAVATEVEAEKQ
HHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH
SGDNRTMGRKFTVPYGLYVAHGFISAHLANQTDFGEDDLELLWQALESMFEHDRSAARGE
CCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
MATRGLYVFKHNSELGNAPAHSLFARIQPKLKNENSIVRDFSDYTVMVDEADLPQGVTLQ
HHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHH
RIVG
HHCC
>Mature Secondary Structure 
TLKNRYDFVLLFDVKDGNPNGDPDAGNLPRVDAETGLGLMTDVALKRKVRNFVSMTRDQ
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCH
SEVTESLNGDKKRFEIYVKEKAILNNQNKRAYVGIGKPELLEGEDKKRKGGNAVEEARQW
HHHHHHHCCCCEEEEEEEEHHHHHCCCCCEEEEECCCCHHCCCCCHHCCCCCHHHHHHHH
MCKNFYDVRTFGAVMSTGINCGQVRGPVQLTFARSINPIVALEHSITRMAVATEVEAEKQ
HHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH
SGDNRTMGRKFTVPYGLYVAHGFISAHLANQTDFGEDDLELLWQALESMFEHDRSAARGE
CCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
MATRGLYVFKHNSELGNAPAHSLFARIQPKLKNENSIVRDFSDYTVMVDEADLPQGVTLQ
HHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHH
RIVG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA