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The map label for this gene is yhbY [C]

Identifier: 114330998

GI number: 114330998

Start: 1026029

End: 1026409

Strand: Reverse

Name: yhbY [C]

Synonym: Neut_0996

Alternate gene names: 114330998

Gene position: 1026409-1026029 (Counterclockwise)

Preceding gene: 114331005

Following gene: 114330997

Centisome position: 38.57

GC content: 46.19

Gene sequence:

>381_bases
ATGCTTGAACTTGATATGGCTCTGCGCCGGCAGCTTACGGCCAGTGCGCACCACCTGAATCCGGTAGTAACGATTGGCAA
GGATGGCCTGGCAGAAAGTATTATTAGTGAGCTCGATCGGAGTCTTTTGAAGCATGAGCTTATCAAGATTAAAGTGCTTG
AAGGCGACCGGGACCAGAGAACTTCTTTGCTGGAGAAAATTTGCCTTTCTCTAAATGCCGCACCTATCAAGCAGATCGGT
AAGATTTTGATTATATACCGGATCAACCCGGATAAAAAAAACGTCGAGACCACGGCTTTGAGCATATCCAAGTCTGGCTT
TAAACCAAAACGCAAACCCAAACCTGCGCAACGAATGAAGAAAGCCCTACCGAGAAAATAA

Upstream 100 bases:

>100_bases
CCTTGCGGACAAAGTTATCGTTGATATGCGCTTTTATCCAGGCTCTGCTGGTTCTGGCAGATTTCATCAGGTAAAATCCA
GTGTTTTTAGGAAGGTTGTA

Downstream 100 bases:

>100_bases
ACAGCCGAAGAAACTGATTGCTATTTCTCTCGGACAAGATTCCCTAATACTTAGTGATCTGGTATAACTCAGACCAGTTT
ACGCATATGGAGATGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLELDMALRRQLTASAHHLNPVVTIGKDGLAESIISELDRSLLKHELIKIKVLEGDRDQRTSLLEKICLSLNAAPIKQIG
KILIIYRINPDKKNVETTALSISKSGFKPKRKPKPAQRMKKALPRK

Sequences:

>Translated_126_residues
MLELDMALRRQLTASAHHLNPVVTIGKDGLAESIISELDRSLLKHELIKIKVLEGDRDQRTSLLEKICLSLNAAPIKQIG
KILIIYRINPDKKNVETTALSISKSGFKPKRKPKPAQRMKKALPRK
>Mature_126_residues
MLELDMALRRQLTASAHHLNPVVTIGKDGLAESIISELDRSLLKHELIKIKVLEGDRDQRTSLLEKICLSLNAAPIKQIG
KILIIYRINPDKKNVETTALSISKSGFKPKRKPKPAQRMKKALPRK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=92, Percent_Identity=35.8695652173913, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 14183; Mature: 14183

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDMALRRQLTASAHHLNPVVTIGKDGLAESIISELDRSLLKHELIKIKVLEGDRDQR
CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
TSLLEKICLSLNAAPIKQIGKILIIYRINPDKKNVETTALSISKSGFKPKRKPKPAQRMK
HHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCCCHHHHHEEHHCCCCCCCCCCCHHHHHH
KALPRK
HHCCCC
>Mature Secondary Structure
MLELDMALRRQLTASAHHLNPVVTIGKDGLAESIISELDRSLLKHELIKIKVLEGDRDQR
CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
TSLLEKICLSLNAAPIKQIGKILIIYRINPDKKNVETTALSISKSGFKPKRKPKPAQRMK
HHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCCCHHHHHEEHHCCCCCCCCCCCHHHHHH
KALPRK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]