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The map label for this gene is fliD [H]

Identifier: 114330953

GI number: 114330953

Start: 980955

End: 982397

Strand: Reverse

Name: fliD [H]

Synonym: Neut_0950

Alternate gene names: 114330953

Gene position: 982397-980955 (Counterclockwise)

Preceding gene: 114330954

Following gene: 114330952

Centisome position: 36.92

GC content: 47.68

Gene sequence:

>1443_bases
ATGCTTTCATCACCAGGAATTGGTTCGGGGCTAGATATCAGTGGGATTATCAGCAAATTGATGCAGGTTGAACAGCGCCC
GCTCACTCAGCTTAATACTAAGGAAGCCAAACAACAGGCACAGCTTTCTGCCTTTGGTAGTCTAAAAAGTGCCTTATCGT
CGTTTCAAGAAAGTGTAAAGGCGCTGGCAAAACCCGCATTATTCACCGGCTTTAAGGCCACATTGACAGATACGACAGTG
GCCACAGTAAGTACATCTGCCAAAGTAGCAGCAGGTGTGCACGAAATTGAAGTGCAATCACTGGCGCAGGCGCAAAAAAT
CAAATCAGAAGCTTTTGTCACGACAGATACGATAATCGGTAACGGTACGCTGACTATTGCATTCGGCACCTATAACGAAG
ACGATACGTTTACCGCCAATACAGAGAAGGCTGCTAAAACTATTACGATTGATCCAGCCAAATCCACACTAAGTGATATT
CGCAACACGATCAATGAAGCAAATACCGGAGTAACGGCAAGCATCGTTAACGATGGCAACGGGAACCGACTGGTAATTGC
TTCCAGAGATACCGGATTAACCAATGCACTGAAAATTACGGTAGACGATGCAGATGGCAATCACACCAATAACACCGGGT
TATCAAAGCTGGCGTTTGATGCGTCATCTACTGGTGGCGTTACCAACATGGCCGAGGCGGTACCAGCAAAAAATGCGAAA
ATGAAGATTGATGGCATAGCGGTGGAAAAATCTTCCAACACTATTAATGATGCACTGGAAGGCGTAACGTTCAATCTGCT
CAAGGCCAATCCAGGCACAAACATGACACTGACAGTGGAGCAGGATAAGGCCAGTGTAGAAACAGCGGTAAAGGCGTTTG
TCACAGCATACAACGAACTGGAGAAAAGCATTGGTAATCTCTCTCGTTACGATACCGCCAACAAACAGGCCTCAGTATTA
ACCGGGGACTCCACTGTGAGAATGGTGCAAAACAGGGTACGAGCCATGCTGACCGGCAACCAATCAGCTGTCGGGGGAAT
CAATTCACTATCCGAACTAGGTATCAGCTTCCAAAAAGATGGCACATTAAAACTGGACAACGGCAAACTGAGCGCAGTAT
TGGTTGATCCGGACAAGAACGTGGCTGCATTTTTTTCCACACAGACAATGGAAGGAACAGAAGGTTTTGCTACCCAGCTG
GATCAGCTGCTCGATGGCATGGCAAGAAGCGATGGCCTGATCAACAACCGCATGGACGGCATTAACAGCACAATCAAAGG
CATCGGCAGACAGCGCGAGGCACTGGAACATCGTCTGGGGGAAGTAGAAAAACGCCTGCGAGCGCAATTCACCGCGCTGG
ATTCGATGGTTGCCAGCATGACTCAGACCAACAATTACCTGCAGCAGCAATTGGCAAATTTGCCCAAGATTGGCGACAAA
TAA

Upstream 100 bases:

>100_bases
TCTTTACGAGATGACGCACTAAAGTAATCCAAAGGCAACAGGAAAATTGGCAATGGTAAAAATTGACGAAATAACACAGA
TCACACCAAGGGTATAGATT

Downstream 100 bases:

>100_bases
TCGCGCCAGATAACGATCATTAACCAATATTCTCATTTCGAAAAGGAGAAAACGATCATGTTCATTGAATCACCTGGCCG
AGCGATCAAGAACTATCAGA

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MLSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKALAKPALFTGFKATLTDTTV
ATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGNGTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDI
RNTINEANTGVTASIVNDGNGNRLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK
MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNELEKSIGNLSRYDTANKQASVL
TGDSTVRMVQNRVRAMLTGNQSAVGGINSLSELGISFQKDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQL
DQLLDGMARSDGLINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLANLPKIGDK

Sequences:

>Translated_480_residues
MLSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKALAKPALFTGFKATLTDTTV
ATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGNGTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDI
RNTINEANTGVTASIVNDGNGNRLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK
MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNELEKSIGNLSRYDTANKQASVL
TGDSTVRMVQNRVRAMLTGNQSAVGGINSLSELGISFQKDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQL
DQLLDGMARSDGLINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLANLPKIGDK
>Mature_480_residues
MLSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKALAKPALFTGFKATLTDTTV
ATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGNGTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDI
RNTINEANTGVTASIVNDGNGNRLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK
MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNELEKSIGNLSRYDTANKQASVL
TGDSTVRMVQNRVRAMLTGNQSAVGGINSLSELGISFQKDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQL
DQLLDGMARSDGLINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLANLPKIGDK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=482, Percent_Identity=34.8547717842324, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50772; Mature: 50772

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAKPALFTGFKATLTDTTVATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIG
HHHCCHHHCCCEEEECCCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
NGTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDIRNTINEANTGVTASIVNDGN
CCEEEEEEECCCCCCCEECCCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCC
GNRLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK
CCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCHHHHHHCCCCCCE
MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNEL
EEEEEEEEECCCCHHHHHHCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
EKSIGNLSRYDTANKQASVLTGDSTVRMVQNRVRAMLTGNQSAVGGINSLSELGISFQKD
HHHHHCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCEEECC
GTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQLDQLLDGMARSDGLINNRMDG
CCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHH
INSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLANLPKIGDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAKPALFTGFKATLTDTTVATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIG
HHHCCHHHCCCEEEECCCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
NGTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDIRNTINEANTGVTASIVNDGN
CCEEEEEEECCCCCCCEECCCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCC
GNRLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK
CCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCHHHHHHCCCCCCE
MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNEL
EEEEEEEEECCCCHHHHHHCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
EKSIGNLSRYDTANKQASVLTGDSTVRMVQNRVRAMLTGNQSAVGGINSLSELGISFQKD
HHHHHCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCEEECC
GTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQLDQLLDGMARSDGLINNRMDG
CCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHH
INSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLANLPKIGDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]