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The map label for this gene is 114330946

Identifier: 114330946

GI number: 114330946

Start: 974969

End: 975382

Strand: Direct

Name: 114330946

Synonym: Neut_0943

Alternate gene names: NA

Gene position: 974969-975382 (Clockwise)

Preceding gene: 114330943

Following gene: 114330950

Centisome position: 36.64

GC content: 46.38

Gene sequence:

>414_bases
ATGCTCTGGATTAAATCGTTACATATCATTTCTATGGTGACCTGGTTTGCCGGGTTGTTTTATTTGCCCAGGTTGTTTGT
TTATCACGCCATGTGTACGGATGAGGCGGGCATAGATCGGTTCAAGGTAATGGAGCGCAAGCTCTATTATGGCATTATGA
CCCCAGGTGGGTTATTGACGATCATTTTTGGTTCGTGGTTATGGCTTGGTTACGGTTTTTCTGGAGGGTGGCTGCACACC
AAGCTGGTACTGGTGGTTTTGCTGATCGCTTACCATTTCTACTGCGGGAAGTTGCTGGTCGATTTCAAGCATGATCGTAA
CCGGCATGGCCATGTTTACTACCGCTGGTTCAATGAATTGCCGGTACTGGCGCTGTTTGCGATTGTTATCTTGGTTGTGG
TCAAACCTTATTAA

Upstream 100 bases:

>100_bases
TGTAAAATAATTATCCGGATTCAAGGGCAAGCGATCGTACTGATTACTTAAAACTTTTCCGGTCCCTGACTTCTTCTGAT
TTTAAACCTGATATTTCACA

Downstream 100 bases:

>100_bases
CAAGGTAGTGCAAAGAATGAATCAGTCTTCTGCGATTGTCTGGCCTGGGAATAGTGTATCGGTATAACCGAATTTTCGCA
GATCATTGATTCGCATAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLWIKSLHIISMVTWFAGLFYLPRLFVYHAMCTDEAGIDRFKVMERKLYYGIMTPGGLLTIIFGSWLWLGYGFSGGWLHT
KLVLVVLLIAYHFYCGKLLVDFKHDRNRHGHVYYRWFNELPVLALFAIVILVVVKPY

Sequences:

>Translated_137_residues
MLWIKSLHIISMVTWFAGLFYLPRLFVYHAMCTDEAGIDRFKVMERKLYYGIMTPGGLLTIIFGSWLWLGYGFSGGWLHT
KLVLVVLLIAYHFYCGKLLVDFKHDRNRHGHVYYRWFNELPVLALFAIVILVVVKPY
>Mature_137_residues
MLWIKSLHIISMVTWFAGLFYLPRLFVYHAMCTDEAGIDRFKVMERKLYYGIMTPGGLLTIIFGSWLWLGYGFSGGWLHT
KLVLVVLLIAYHFYCGKLLVDFKHDRNRHGHVYYRWFNELPVLALFAIVILVVVKPY

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16122; Mature: 16122

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWIKSLHIISMVTWFAGLFYLPRLFVYHAMCTDEAGIDRFKVMERKLYYGIMTPGGLLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCHHHH
IIFGSWLWLGYGFSGGWLHTKLVLVVLLIAYHFYCGKLLVDFKHDRNRHGHVYYRWFNEL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCC
PVLALFAIVILVVVKPY
CHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWIKSLHIISMVTWFAGLFYLPRLFVYHAMCTDEAGIDRFKVMERKLYYGIMTPGGLLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCHHHH
IIFGSWLWLGYGFSGGWLHTKLVLVVLLIAYHFYCGKLLVDFKHDRNRHGHVYYRWFNEL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCC
PVLALFAIVILVVVKPY
CHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]