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The map label for this gene is yadH [H]

Identifier: 114330863

GI number: 114330863

Start: 873549

End: 874304

Strand: Direct

Name: yadH [H]

Synonym: Neut_0857

Alternate gene names: 114330863

Gene position: 873549-874304 (Clockwise)

Preceding gene: 114330862

Following gene: 114330864

Centisome position: 32.83

GC content: 44.31

Gene sequence:

>756_bases
ATGACCGGTTTTTATACCTTGTTTTACAAGGAATTATTGCGTTTCTGGAAAGTCAGTTTGCAGACGATACTGGCGCCAAT
CTTGTCCAGCTTGCTTTATCTACTGATTTTTTCTCATGTACTTGCTAATCGGGTGCAAGTTTATGATGGTGTTACTTATG
CTGTATTTCTGATTCCCGGGTTGGTAATGATGACGGTTTTGCAAAACTCCTTTGCTAATTCATCTTCCAGCCTGATCCAG
TCGAAAATAACGGGGAATCTAGTATTCGTCCTGCTGTCACCCCTGTCTTACCTGGAAATCTTTCTGGCCTATATCAGTGC
CTCAACATTGCGTGGACTCATGGTTGGCATGGGTGTGTATGCTGCTGCCCTTCTATTTTATCCGTTGCCCCTGCAGTCGC
CACTCTGGGTTATATTATTTGCGTTGCTTGGTAGCGCTCTGCTGGGAGTGCTAGGCGTCATTGCCGGGATTATGTCGGAT
AAGTTTGATCAACTGGCTGCTTTTCAGAATTTCATTATTCTACCGCTGACTTTTCTTTCCGGTGTGTTTTATTCCATTCA
TTCTCTGCCACCTGTATGGCAGCTTCTGTCGCATCTGAATCCGTTCTTTTACATGATCGATGGTTTCCGCTATGGTTTTT
TTGGTATCTCTGATATTTCGCCTTATATCAGCATGAGCGTTGTGCTGTGCTGTCTCATCGTGATTTCAGGGTGGGCATTA
TGGATGCTGAAAAGCGGCTACAAAATACGCTCGTAA

Upstream 100 bases:

>100_bases
TACGAGAATCTGGAATACAGGTGTTTGATATTAAACTGCTTCAGCCTGACCTTGAGTCGGTATTCATGAAGCTTATGGAA
GCTGATTCGGCAGGTAGCGC

Downstream 100 bases:

>100_bases
GCGAAATGGAACAGCTTTTATATTTTTATGGATAAGGAGTAGTTGTGGTTACAGCAGAGTCAATCGAACATTCAATTAAA
ACTGCGTTGCCTTGTACCTG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTGFYTLFYKELLRFWKVSLQTILAPILSSLLYLLIFSHVLANRVQVYDGVTYAVFLIPGLVMMTVLQNSFANSSSSLIQ
SKITGNLVFVLLSPLSYLEIFLAYISASTLRGLMVGMGVYAAALLFYPLPLQSPLWVILFALLGSALLGVLGVIAGIMSD
KFDQLAAFQNFIILPLTFLSGVFYSIHSLPPVWQLLSHLNPFFYMIDGFRYGFFGISDISPYISMSVVLCCLIVISGWAL
WMLKSGYKIRS

Sequences:

>Translated_251_residues
MTGFYTLFYKELLRFWKVSLQTILAPILSSLLYLLIFSHVLANRVQVYDGVTYAVFLIPGLVMMTVLQNSFANSSSSLIQ
SKITGNLVFVLLSPLSYLEIFLAYISASTLRGLMVGMGVYAAALLFYPLPLQSPLWVILFALLGSALLGVLGVIAGIMSD
KFDQLAAFQNFIILPLTFLSGVFYSIHSLPPVWQLLSHLNPFFYMIDGFRYGFFGISDISPYISMSVVLCCLIVISGWAL
WMLKSGYKIRS
>Mature_250_residues
TGFYTLFYKELLRFWKVSLQTILAPILSSLLYLLIFSHVLANRVQVYDGVTYAVFLIPGLVMMTVLQNSFANSSSSLIQS
KITGNLVFVLLSPLSYLEIFLAYISASTLRGLMVGMGVYAAALLFYPLPLQSPLWVILFALLGSALLGVLGVIAGIMSDK
FDQLAAFQNFIILPLTFLSGVFYSIHSLPPVWQLLSHLNPFFYMIDGFRYGFFGISDISPYISMSVVLCCLIVISGWALW
MLKSGYKIRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=247, Percent_Identity=37.6518218623482, Blast_Score=174, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27985; Mature: 27854

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCC
>Mature Secondary Structure 
TGFYTLFYKELLRFWKVSLQTILAPILSSLLYLLIFSHVLANRVQVYDGVTYAVFLIPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LVMMTVLQNSFANSSSSLIQSKITGNLVFVLLSPLSYLEIFLAYISASTLRGLMVGMGVY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALLFYPLPLQSPLWVILFALLGSALLGVLGVIAGIMSDKFDQLAAFQNFIILPLTFLS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFYSIHSLPPVWQLLSHLNPFFYMIDGFRYGFFGISDISPYISMSVVLCCLIVISGWAL
HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
WMLKSGYKIRS
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]