| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is norD [H]
Identifier: 114330826
GI number: 114330826
Start: 832375
End: 834735
Strand: Direct
Name: norD [H]
Synonym: Neut_0816
Alternate gene names: 114330826
Gene position: 832375-834735 (Clockwise)
Preceding gene: 114330825
Following gene: 114330827
Centisome position: 31.28
GC content: 57.22
Gene sequence:
>2361_bases ATGGCTATTCACCTTGAAGAATTCCAGAGTTTGCTCGACGAGCTACCCGGCAGTGCGCAGGAACTGCTGCGCGCGTCTTG GAACGAGGCGGCGCGCGCACTCACGCCGCGTGGCTTAGATAACTACCTCAAAGGAGCGGTCGCGTTGCATCACCTCGGCC GCGGGGAGGACCTTGTGGTCGGTTTCATCCAATCCATGCCCGAGTTGGCGCGCGGAGTGGGTGAGGAAGTACTGCCTGAC CTAGTCAACTTCCTTCTTGGCATGGCATCCAAGACCTCGGGCCATGTGCTTGCGCTGATCGTCGGCACTGCGCCATTAGC GGCACAGCGCTTGAGCGATGCCGGCCTATTCGTCAGTTATCTGAAGGTGCTCGAGATCATGCTGGCCCAGGCGCCTCGCG GCCTGCGACCGATGCTGGAAAACTTGGACCGTCTGCTTACCCAGCTCACTCTGGGCGGCTTGCGGCGCTGGGTGCAGTGG GGTGCACAGGCGTATCGCAGCGATTTAGACGGTCAGGTAGCGTACTTTTCTCTGCAAAGCGCCGACGCGCTGGCTGTGCT GCAGCAGGAGCGCAAGGGCACGCTGTTCGTCGACATTCAGCGTCGTTTGAACATCTATCAGCGCGCAATGTGGGGACGTG ATTTTTTCCTGCGCCCTACTTCCGGCGATTACGAAAGCCGTGAAGAGTTGAAGCCCTACATTGAGCATTACGTCATTCAT ATTGCCGATGCCTACGACAATTACAAGCCACTGGGCCCCGATACGCCGCCCGAGCAATGCGTGCCGGCACTAGAGATCTA CCGCGCCGCAGTTAACCATTGTGCTGCGCATCTGGTGTTCACTCAACAGCCGCTGTCCATGCAGATGTTGCATCCAGCGC AAATGGCGGTGATTGAGGTATTCGAAGATGCGCGGGTCGAGGAGCTGTCAATCCGGCAGTTTCCGAACATGCGCGAAGCT TGGCTGATGCTGCATCCGGTGTTCGATTACTCTCGTGAGCCGCAGAGCATCGGCGAATTGCTCGACCGCCTGGGCCGCGC CCTGCTTGAAGAGCAGAGCCACGATCCTCATCCGTGGGTGCGTGAGGCCGTGGTGGCGTTTCGCGCACAGACCGATCTTT CGACCAATCAGACAAGCTGGAACCTCGGCATAGACTTGTCGCACAAGCTGTTCGAGTTGCCGCTACCCGAGTTCAACAAC CGTACCGACCACCGCTTGAGCGCGATCTACCGAGACGACAACCGAGCGGTATGGCAGCTCGAAGAGTACGACGAGGCACA GGCACTGGAGGCTACTTGGCAGACGCGGCAGCAGGTACGCAAAAAAGTCAACCTGATGGAAATGGTCAACGAGGTGGATA ACGAGTTTGCCGGTGATGACGCGCAGGAAGTCTGGGAACTGCCGACCGAATATCTGTTCGATGACGGCGTCAGCATCAAC GAACTCGAAGGTCGACCACCGATTTCCGAGCCTTTCCATTATCCCGAGTGGGACTATAAGATTCAGCTCGAACGCCCGAA CTGGGTCACCGTGCTCGAACACCATCCACCCGTGGGCGAACTCGCAATTATCGAGAACATCATCATCGAAAATAAGCCAG TGATCTCACGGCTGAAATTCCTGATCGAATCGATGGTGCCACAAGGCATGCAGCGCATCAGGCACGTAGAGGACGGCGAC GATCTCGATATCAACGCCGCAGTGCGCGCGATGATCGACATCCGCATGGGCCAACCACCGGACCCGCGCATCATGATGCG GTACAAGCGCACGCTGCGCGAGCTTGCAGTGATGGTACTGCTGGATATGTCCGAATCGTCCAACGACAAGGTGCGCGGAC ACGACTACACGATAATGGATCTCACCCGCGCAGCCACAGTGTTATTCGCCGACGCGCTCGATCGCATCGGCGACCCATTT GCGATCCATGGCTTTTGCTCCGATGGACGGCACGACGTGCATTATCATCGTTTCAAAGATTTCGACCAGCCGTATGGTGA CATCGCCAAGGCTCGCTTAGCCGGCATGAAGGGCCATTTTTCTACACGCATGGGCGCAGCGCTGCGTCACGCTGGATATT ATCTGGCGCAGCAGCCCAAATCCAAGCGGGTAATTTTTGTCATCACCGACGGCGAACCGGCCGACAACGACGTGCACGAC CCGCAATATCTGCGCTATGATACTAAACATGCAGTCGAAGAACTCGCGCGTAAGGGCATTACGGTGTATGCGTTATCCCT CGATCCGCATGCTGACCAATATGTGTCGCGTATTTTTGGAGCTAAGAACTTCACCGTCATTGACGAAGTCGAGCGCCTGC CGGAGAAATTGCCGATGCTCTACATGAGCCTCACACGTTAA
Upstream 100 bases:
>100_bases GTCGCCCTGGTGCGACCGATCACCGACGACCCTGACATGCGCGATGCGCTTGATGCGGCTGTAACCACCTACTTCTGATG GGCGACATGGGTCTCGCATT
Downstream 100 bases:
>100_bases GGGCGCCATGCAATGAAAATAAGCTTGCGTACCTTCGTATTTCTCGACGCACTGCAACCGCAGCTCGCATCTTATCTCGC CACCTCGTCGCAAGGCTTTC
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 786; Mature: 785
Protein sequence:
>786_residues MAIHLEEFQSLLDELPGSAQELLRASWNEAARALTPRGLDNYLKGAVALHHLGRGEDLVVGFIQSMPELARGVGEEVLPD LVNFLLGMASKTSGHVLALIVGTAPLAAQRLSDAGLFVSYLKVLEIMLAQAPRGLRPMLENLDRLLTQLTLGGLRRWVQW GAQAYRSDLDGQVAYFSLQSADALAVLQQERKGTLFVDIQRRLNIYQRAMWGRDFFLRPTSGDYESREELKPYIEHYVIH IADAYDNYKPLGPDTPPEQCVPALEIYRAAVNHCAAHLVFTQQPLSMQMLHPAQMAVIEVFEDARVEELSIRQFPNMREA WLMLHPVFDYSREPQSIGELLDRLGRALLEEQSHDPHPWVREAVVAFRAQTDLSTNQTSWNLGIDLSHKLFELPLPEFNN RTDHRLSAIYRDDNRAVWQLEEYDEAQALEATWQTRQQVRKKVNLMEMVNEVDNEFAGDDAQEVWELPTEYLFDDGVSIN ELEGRPPISEPFHYPEWDYKIQLERPNWVTVLEHHPPVGELAIIENIIIENKPVISRLKFLIESMVPQGMQRIRHVEDGD DLDINAAVRAMIDIRMGQPPDPRIMMRYKRTLRELAVMVLLDMSESSNDKVRGHDYTIMDLTRAATVLFADALDRIGDPF AIHGFCSDGRHDVHYHRFKDFDQPYGDIAKARLAGMKGHFSTRMGAALRHAGYYLAQQPKSKRVIFVITDGEPADNDVHD PQYLRYDTKHAVEELARKGITVYALSLDPHADQYVSRIFGAKNFTVIDEVERLPEKLPMLYMSLTR
Sequences:
>Translated_786_residues MAIHLEEFQSLLDELPGSAQELLRASWNEAARALTPRGLDNYLKGAVALHHLGRGEDLVVGFIQSMPELARGVGEEVLPD LVNFLLGMASKTSGHVLALIVGTAPLAAQRLSDAGLFVSYLKVLEIMLAQAPRGLRPMLENLDRLLTQLTLGGLRRWVQW GAQAYRSDLDGQVAYFSLQSADALAVLQQERKGTLFVDIQRRLNIYQRAMWGRDFFLRPTSGDYESREELKPYIEHYVIH IADAYDNYKPLGPDTPPEQCVPALEIYRAAVNHCAAHLVFTQQPLSMQMLHPAQMAVIEVFEDARVEELSIRQFPNMREA WLMLHPVFDYSREPQSIGELLDRLGRALLEEQSHDPHPWVREAVVAFRAQTDLSTNQTSWNLGIDLSHKLFELPLPEFNN RTDHRLSAIYRDDNRAVWQLEEYDEAQALEATWQTRQQVRKKVNLMEMVNEVDNEFAGDDAQEVWELPTEYLFDDGVSIN ELEGRPPISEPFHYPEWDYKIQLERPNWVTVLEHHPPVGELAIIENIIIENKPVISRLKFLIESMVPQGMQRIRHVEDGD DLDINAAVRAMIDIRMGQPPDPRIMMRYKRTLRELAVMVLLDMSESSNDKVRGHDYTIMDLTRAATVLFADALDRIGDPF AIHGFCSDGRHDVHYHRFKDFDQPYGDIAKARLAGMKGHFSTRMGAALRHAGYYLAQQPKSKRVIFVITDGEPADNDVHD PQYLRYDTKHAVEELARKGITVYALSLDPHADQYVSRIFGAKNFTVIDEVERLPEKLPMLYMSLTR >Mature_785_residues AIHLEEFQSLLDELPGSAQELLRASWNEAARALTPRGLDNYLKGAVALHHLGRGEDLVVGFIQSMPELARGVGEEVLPDL VNFLLGMASKTSGHVLALIVGTAPLAAQRLSDAGLFVSYLKVLEIMLAQAPRGLRPMLENLDRLLTQLTLGGLRRWVQWG AQAYRSDLDGQVAYFSLQSADALAVLQQERKGTLFVDIQRRLNIYQRAMWGRDFFLRPTSGDYESREELKPYIEHYVIHI ADAYDNYKPLGPDTPPEQCVPALEIYRAAVNHCAAHLVFTQQPLSMQMLHPAQMAVIEVFEDARVEELSIRQFPNMREAW LMLHPVFDYSREPQSIGELLDRLGRALLEEQSHDPHPWVREAVVAFRAQTDLSTNQTSWNLGIDLSHKLFELPLPEFNNR TDHRLSAIYRDDNRAVWQLEEYDEAQALEATWQTRQQVRKKVNLMEMVNEVDNEFAGDDAQEVWELPTEYLFDDGVSINE LEGRPPISEPFHYPEWDYKIQLERPNWVTVLEHHPPVGELAIIENIIIENKPVISRLKFLIESMVPQGMQRIRHVEDGDD LDINAAVRAMIDIRMGQPPDPRIMMRYKRTLRELAVMVLLDMSESSNDKVRGHDYTIMDLTRAATVLFADALDRIGDPFA IHGFCSDGRHDVHYHRFKDFDQPYGDIAKARLAGMKGHFSTRMGAALRHAGYYLAQQPKSKRVIFVITDGEPADNDVHDP QYLRYDTKHAVEELARKGITVYALSLDPHADQYVSRIFGAKNFTVIDEVERLPEKLPMLYMSLTR
Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 89855; Mature: 89723
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHLEEFQSLLDELPGSAQELLRASWNEAARALTPRGLDNYLKGAVALHHLGRGEDLVV CEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH GFIQSMPELARGVGEEVLPDLVNFLLGMASKTSGHVLALIVGTAPLAAQRLSDAGLFVSY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LKVLEIMLAQAPRGLRPMLENLDRLLTQLTLGGLRRWVQWGAQAYRSDLDGQVAYFSLQS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC ADALAVLQQERKGTLFVDIQRRLNIYQRAMWGRDFFLRPTSGDYESREELKPYIEHYVIH CHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH IADAYDNYKPLGPDTPPEQCVPALEIYRAAVNHCAAHLVFTQQPLSMQMLHPAQMAVIEV EEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCHHHHHHHHH FEDARVEELSIRQFPNMREAWLMLHPVFDYSREPQSIGELLDRLGRALLEEQSHDPHPWV HHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH REAVVAFRAQTDLSTNQTSWNLGIDLSHKLFELPLPEFNNRTDHRLSAIYRDDNRAVWQL HHHHHHHHHHCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCHHHHHEEECCCCEEEEE EEYDEAQALEATWQTRQQVRKKVNLMEMVNEVDNEFAGDDAQEVWELPTEYLFDDGVSIN HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCC ELEGRPPISEPFHYPEWDYKIQLERPNWVTVLEHHPPVGELAIIENIIIENKPVISRLKF CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH LIESMVPQGMQRIRHVEDGDDLDINAAVRAMIDIRMGQPPDPRIMMRYKRTLRELAVMVL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LDMSESSNDKVRGHDYTIMDLTRAATVLFADALDRIGDPFAIHGFCSDGRHDVHYHRFKD HCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHC FDQPYGDIAKARLAGMKGHFSTRMGAALRHAGYYLAQQPKSKRVIFVITDGEPADNDVHD CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC PQYLRYDTKHAVEELARKGITVYALSLDPHADQYVSRIFGAKNFTVIDEVERLPEKLPML CHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YMSLTR HHHHCC >Mature Secondary Structure AIHLEEFQSLLDELPGSAQELLRASWNEAARALTPRGLDNYLKGAVALHHLGRGEDLVV EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH GFIQSMPELARGVGEEVLPDLVNFLLGMASKTSGHVLALIVGTAPLAAQRLSDAGLFVSY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LKVLEIMLAQAPRGLRPMLENLDRLLTQLTLGGLRRWVQWGAQAYRSDLDGQVAYFSLQS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC ADALAVLQQERKGTLFVDIQRRLNIYQRAMWGRDFFLRPTSGDYESREELKPYIEHYVIH CHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH IADAYDNYKPLGPDTPPEQCVPALEIYRAAVNHCAAHLVFTQQPLSMQMLHPAQMAVIEV EEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCHHHHHHHHH FEDARVEELSIRQFPNMREAWLMLHPVFDYSREPQSIGELLDRLGRALLEEQSHDPHPWV HHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH REAVVAFRAQTDLSTNQTSWNLGIDLSHKLFELPLPEFNNRTDHRLSAIYRDDNRAVWQL HHHHHHHHHHCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCHHHHHEEECCCCEEEEE EEYDEAQALEATWQTRQQVRKKVNLMEMVNEVDNEFAGDDAQEVWELPTEYLFDDGVSIN HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCC ELEGRPPISEPFHYPEWDYKIQLERPNWVTVLEHHPPVGELAIIENIIIENKPVISRLKF CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH LIESMVPQGMQRIRHVEDGDDLDINAAVRAMIDIRMGQPPDPRIMMRYKRTLRELAVMVL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LDMSESSNDKVRGHDYTIMDLTRAATVLFADALDRIGDPFAIHGFCSDGRHDVHYHRFKD HCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHC FDQPYGDIAKARLAGMKGHFSTRMGAALRHAGYYLAQQPKSKRVIFVITDGEPADNDVHD CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC PQYLRYDTKHAVEELARKGITVYALSLDPHADQYVSRIFGAKNFTVIDEVERLPEKLPML CHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YMSLTR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA