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The map label for this gene is ybeD [C]

Identifier: 114330772

GI number: 114330772

Start: 776874

End: 777137

Strand: Reverse

Name: ybeD [C]

Synonym: Neut_0759

Alternate gene names: 114330772

Gene position: 777137-776874 (Counterclockwise)

Preceding gene: 114330773

Following gene: 114330771

Centisome position: 29.2

GC content: 45.45

Gene sequence:

>264_bases
ATGACAGAAGAATCGCTTATTGAATATCCTTGTGATTTCCCAATAAAAATTATGGGGAAGGCACAGCAGGGATTCACTCA
ATCCATGCTGGCCATTGTCAAAACACATGCTCCTGACTTTGACGATACAACTCTCGAAGTTCGTACCAGTAAATGCGGAA
CTTACCTGAGCCTTACCTGCACAATCCGCGCAACTTCGCGCACACAGCTGGATTCTCTCTATCAGACACTGCATAACCAC
CCAATGGTAACGATGCTTCTGTAG

Upstream 100 bases:

>100_bases
TGGTGTGCCCGGCCCCATATTTCAGCAACTCAATCGGCACTATCAAGCATATAAACAGACAGTAATGCGCGGATACACCT
CGCCCCAGTAATACAATCTC

Downstream 100 bases:

>100_bases
GCTGATCAGTGTTCGATATCATCATACTCACCACGAGTAATAAGCCCATTCTGTAGAAAAACACATGTCCCACCCTGAAC
AACGGGCATGCAAACTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTEESLIEYPCDFPIKIMGKAQQGFTQSMLAIVKTHAPDFDDTTLEVRTSKCGTYLSLTCTIRATSRTQLDSLYQTLHNH
PMVTMLL

Sequences:

>Translated_87_residues
MTEESLIEYPCDFPIKIMGKAQQGFTQSMLAIVKTHAPDFDDTTLEVRTSKCGTYLSLTCTIRATSRTQLDSLYQTLHNH
PMVTMLL
>Mature_86_residues
TEESLIEYPCDFPIKIMGKAQQGFTQSMLAIVKTHAPDFDDTTLEVRTSKCGTYLSLTCTIRATSRTQLDSLYQTLHNHP
MVTMLL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9829; Mature: 9698

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEESLIEYPCDFPIKIMGKAQQGFTQSMLAIVKTHAPDFDDTTLEVRTSKCGTYLSLTC
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE
TIRATSRTQLDSLYQTLHNHPMVTMLL
EEEECCCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
TEESLIEYPCDFPIKIMGKAQQGFTQSMLAIVKTHAPDFDDTTLEVRTSKCGTYLSLTC
CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE
TIRATSRTQLDSLYQTLHNHPMVTMLL
EEEECCCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]