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The map label for this gene is cyaB [H]

Identifier: 114330712

GI number: 114330712

Start: 701744

End: 702745

Strand: Reverse

Name: cyaB [H]

Synonym: Neut_0697

Alternate gene names: 114330712

Gene position: 702745-701744 (Counterclockwise)

Preceding gene: 114330717

Following gene: 114330711

Centisome position: 26.41

GC content: 51.6

Gene sequence:

>1002_bases
ATGAGAACAGTGATGCCCAAATCCACAACGCCAGTGTCTGTGCTACACATGCATGGCCTTGGCTTACAACAAACCGGCAC
TTTGTCTGTTCATTATGTTGCACTCTTGTTGCTCTCAGGATGTAACAGTGCCGAACATTTGAGCTTCCTCAATCCACAAG
GCCCAATTGCGACAGCTCAAAGTGAACATTTCTGGCTGGTCGTGGCCATCCTCTTCATTCTGATTGCGCTGCCTGTGTTT
ATCGGTACGGCGTGGATTGCATGGCACTATCGCTATGGCGCCACCAAATCCAAATACGTGCCACGATGGGAGATCTTCAA
ACCACTCGAATATTTCAGTTGGGGCATCCCAATCGCCATTGTTCTTTTTTTAAGCGTCTTGGTATGGGAAGATACAGAAC
GCTTTGACCCTTATCACACCCTTGCGTCCAGTAAACCAGCAACCCATGTCCAGGTAATTGGCTACGATTGGAAGTGGCTC
TTTGTTTATCCTGAGCATGGCATTGCCAGCGTCGGCATGCTGGCGTTTCCTGCCGAGCAGCCGCTAACCATGGAGCTGAC
TTCAGCCACGGTGATGCAATCATTTTTCATTCCAGCATTAGGCAGCCAGATTTATGCCATGGGCGGCATGGTCACACAGC
TCAATCTGCAAGCCGACCGGCCGGGCCACTTCCTCGGTGAAAACACCATGTATAGCGGCGATGGCTTCCACCAGCAAAAG
TTTGTCGCTGTGGCGATGACGCTGACAGACTTTGATGCCTGGGTGCAGCAAGTCCGCGCTACCGGAATCCCGTTCGATGC
AGCCGCATTGAACGCCATTGCAACGCAAGGAACCAAGGCACAGCTGAGCACAGCGCTGGCACCAGCAGCTCCGACCTTCG
ATGGTAATGTTTACTTCACAGGCGTGAAAGCTAATTTCTTCACCGATTTAGTGATATCAGTCATGGATGAGAAACCATTG
CCGTCAACCGCGCTGGCGCCCGCGATCACTAAGGGTCAATAA

Upstream 100 bases:

>100_bases
AATCATACTGCAAGCCAGTTTTTGAACTGGTCAATATGCATGAGTATCTAATGTAGGACTGGTTGATCGTAGTTTGTAGT
TATTATCGACGCAGAGCCAA

Downstream 100 bases:

>100_bases
CCTATGAGCTGGTCTACCATTTTCAATCATCCGCTAGGACTTCTCGGTGCGGATTCGTTTCCGTTTCTGGCCATGCTCAG
CAGCGATGATAGCGATATTT

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome A1 subunit 2; Oxidase BA(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRTVMPKSTTPVSVLHMHGLGLQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVF
IGTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTLASSKPATHVQVIGYDWKWL
FVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQK
FVAVAMTLTDFDAWVQQVRATGIPFDAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVMDEKPL
PSTALAPAITKGQ

Sequences:

>Translated_333_residues
MRTVMPKSTTPVSVLHMHGLGLQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVF
IGTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTLASSKPATHVQVIGYDWKWL
FVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQK
FVAVAMTLTDFDAWVQQVRATGIPFDAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVMDEKPL
PSTALAPAITKGQ
>Mature_333_residues
MRTVMPKSTTPVSVLHMHGLGLQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVF
IGTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTLASSKPATHVQVIGYDWKWL
FVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQK
FVAVAMTLTDFDAWVQQVRATGIPFDAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVMDEKPL
PSTALAPAITKGQ

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=286, Percent_Identity=37.4125874125874, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 36560; Mature: 36560

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVMPKSTTPVSVLHMHGLGLQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQ
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHCEECCCCCCEECCC
SEHFWLVVAILFILIALPVFIGTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAI
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCCHHHHCCCHHHHH
VLFLSVLVWEDTERFDPYHTLASSKPATHVQVIGYDWKWLFVYPEHGIASVGMLAFPAEQ
HHHHHHHHHCCCHHCCCHHHHHCCCCCCEEEEEEECEEEEEEECCCCCCCCCEEEECCCC
PLTMELTSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQK
CEEEEHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEECCCCCCCCCCCCEECCCCCCHHE
FVAVAMTLTDFDAWVQQVRATGIPFDAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFT
EEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEE
GVKANFFTDLVISVMDEKPLPSTALAPAITKGQ
EEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRTVMPKSTTPVSVLHMHGLGLQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQ
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHCEECCCCCCEECCC
SEHFWLVVAILFILIALPVFIGTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAI
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCCHHHHCCCHHHHH
VLFLSVLVWEDTERFDPYHTLASSKPATHVQVIGYDWKWLFVYPEHGIASVGMLAFPAEQ
HHHHHHHHHCCCHHCCCHHHHHCCCCCCEEEEEEECEEEEEEECCCCCCCCCEEEECCCC
PLTMELTSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQK
CEEEEHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEECCCCCCCCCCCCEECCCCCCHHE
FVAVAMTLTDFDAWVQQVRATGIPFDAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFT
EEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEE
GVKANFFTDLVISVMDEKPLPSTALAPAITKGQ
EEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8392509 [H]