| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
Click here to switch to the map view.
The map label for this gene is yjgA [C]
Identifier: 114330704
GI number: 114330704
Start: 694675
End: 695205
Strand: Direct
Name: yjgA [C]
Synonym: Neut_0689
Alternate gene names: 114330704
Gene position: 694675-695205 (Clockwise)
Preceding gene: 114330698
Following gene: 114330705
Centisome position: 26.11
GC content: 50.66
Gene sequence:
>531_bases GTGACTGTGCCCAACCATCAGCAGGATATTTCCGACTCCGACCTTGAATCCCGGCCGAGTAAGACCCGTCTTAAACAAGA AATGCATGCTTTGCAGGTGCTGGGTGAGCGGCTGGTTGAGCTTGAACCGGCCAGAATAACCGAGTTGGATCTGCCAGAAA AACTGACAGACGCACTGCTTGAAGCCCGCAGAATAACCAGTCATGGTGCGCGTCGCCGCCAGATGCAATTTATTGGCAAG CTGATGCGTGCAATTGATCCTGTGCCTGTTCAGGAAAAATTGGATGCGTGGCAGCATTCCAGCCTGAAGCATACTGCATG GCTGCATCAACTGGAGCGATGGCGTGATCGCCTGATCAGCGATGAGGCGGCTGTGACTGAATTCGTGCAAAGCTATCCAC AAACTGATGTCCGGCAGTTGCGTACCTTGTTGCGCAATGTTGAAAAGGAAAAACTGGCAAACAAACCTCCTAAAAGTTTT CGTGCCTTGTTTCAACTATTGCGACAGATTATTCCGGAAATATCGGCGTAG
Upstream 100 bases:
>100_bases ATCCATGTGGCATGGACATTACTCTTCAGTGTGCCATGCTTATTACTAAGGTTCCCTAAAGCGGGTTATGATACCAGTTT CTTGACTGTTCCCGATACGT
Downstream 100 bases:
>100_bases GTGTGTCATTGGGCTGGATTGCTTGCCATGACTAAAATACCGCCTTTGCGAACATTGCAGGTGTGAAGTAATCGAGCAAG TTTTGAAAAATTATTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTVPNHQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALLEARRITSHGARRRQMQFIGK LMRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLISDEAAVTEFVQSYPQTDVRQLRTLLRNVEKEKLANKPPKSF RALFQLLRQIIPEISA
Sequences:
>Translated_176_residues MTVPNHQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALLEARRITSHGARRRQMQFIGK LMRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLISDEAAVTEFVQSYPQTDVRQLRTLLRNVEKEKLANKPPKSF RALFQLLRQIIPEISA >Mature_175_residues TVPNHQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALLEARRITSHGARRRQMQFIGKL MRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLISDEAAVTEFVQSYPQTDVRQLRTLLRNVEKEKLANKPPKSFR ALFQLLRQIIPEISA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family
Homologues:
Organism=Escherichia coli, GI1790681, Length=152, Percent_Identity=40.1315789473684, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y689_NITEC (Q0AI71)
Other databases:
- EMBL: CP000450 - RefSeq: YP_746926.1 - ProteinModelPortal: Q0AI71 - SMR: Q0AI71 - STRING: Q0AI71 - GeneID: 4273053 - GenomeReviews: CP000450_GR - KEGG: net:Neut_0689 - NMPDR: fig|335283.3.peg.194 - eggNOG: COG3028 - HOGENOM: HBG677712 - OMA: KAPWEEE - PhylomeDB: Q0AI71 - ProtClustDB: PRK05255 - BioCyc: NEUT335283:NEUT_0689-MONOMER - HAMAP: MF_00765 - InterPro: IPR023153 - InterPro: IPR006839 - PIRSF: PIRSF016183
Pfam domain/function: PF04751 DUF615
EC number: NA
Molecular weight: Translated: 20554; Mature: 20423
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPNHQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALL CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH EARRITSHGARRRQMQFIGKLMRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLIS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DEAAVTEFVQSYPQTDVRQLRTLLRNVEKEKLANKPPKSFRALFQLLRQIIPEISA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVPNHQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALL CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH EARRITSHGARRRQMQFIGKLMRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLIS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DEAAVTEFVQSYPQTDVRQLRTLLRNVEKEKLANKPPKSFRALFQLLRQIIPEISA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA