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The map label for this gene is 114330652

Identifier: 114330652

GI number: 114330652

Start: 648824

End: 649807

Strand: Reverse

Name: 114330652

Synonym: Neut_0637

Alternate gene names: NA

Gene position: 649807-648824 (Counterclockwise)

Preceding gene: 114330653

Following gene: 114330649

Centisome position: 24.42

GC content: 43.6

Gene sequence:

>984_bases
ATGAGCCAATCACACACTCTCCCGCCCGCTTTGACTGGCGATAAAAGTCATTTATCTGAACAGGCACGCAAAGAAATTCA
GGCACTCAGTGGTGCAAGACCAAAAGAATTTTTCCTGCAGGCACTAGGCGCATGGATTGTTATTATCGCCACCATCATGC
TTGCTACTCATCTTGATACTATCTGGATGACATTGCTTGCTCTGCCAATTATTGCCACACGTTTCAATATCCTGGGATTA
CTGGCGCATGAACAGGTACACCAGCTCGGTTTACGAGGGCGATATGGTGATACGGTGGCCAATATTCTGACCGCTTACCC
GATAGGCATTACAGTGGAGGACTACGCCAGAGTTCATTTATCCCATCACAAGTACTATTTCACCAAAGATGATCCAGATT
TTTTGCGCAAATCCGGGCCGGACTGGACATTTCCCATGCCAACCCTGCACCTGACCAAACTGTTATTAAGCGATTTATGT
GGATTGAGTTTTTACAGAATCTTACAGGGCAAACGCCTGGAAAATAAACAGATTTACAAGCGACTGTATCCTGCACCAAA
ATGGCTCCGATCTGCTTTTTACATCGGGCTGGCTATTTTACTGACTTATTTTGAATTGTGGCCCGCGTTTCTGGTTTACT
GGTTGTTGCCATTAATGACATTCACACCGTTAATTGTGCGTCTGGGCGCTGTTTGTGAGCATGTTTACAACCTGCCTCAA
GCAAGCATCGCTGAATCTTCTCCACTCATTATCCTACGCTGGTGGGAAAAACTATTGTTACCTAATCTTAATTTTGCACT
ACACACCTACCATCATTTTTTCCCTGGTATTGCCTGGTGCAACCTTCCCAAAGCACATGAAATTTTTAAGCGAGAAAATC
TGATCAACGAGAAAGCTGTATTTTATGGTTATTGGGCATATCTGAGATATTTACAGACAACTCAAAGCAACGTGTTGATT
CCCTCATATAGAAATACCCAATAA

Upstream 100 bases:

>100_bases
CAAACATACTTTGATTCTCAATTTATTCGCAATTATGCCGCTGAATATGAAGAAAATCGCTTCCTTCCTATCCAAAACTT
GCGAATTAATGAGGTATCTT

Downstream 100 bases:

>100_bases
AAAAGAGAGGGTATTGACCCCCCCTTTTTTACTACATCGGTAACTAATCAATAGTTAAGCTTGCAAGGAACTTCCCTTTG
AGCGGCTGACAAAACCAAAA

Product: fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain-Containing Protein

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSQSHTLPPALTGDKSHLSEQARKEIQALSGARPKEFFLQALGAWIVIIATIMLATHLDTIWMTLLALPIIATRFNILGL
LAHEQVHQLGLRGRYGDTVANILTAYPIGITVEDYARVHLSHHKYYFTKDDPDFLRKSGPDWTFPMPTLHLTKLLLSDLC
GLSFYRILQGKRLENKQIYKRLYPAPKWLRSAFYIGLAILLTYFELWPAFLVYWLLPLMTFTPLIVRLGAVCEHVYNLPQ
ASIAESSPLIILRWWEKLLLPNLNFALHTYHHFFPGIAWCNLPKAHEIFKRENLINEKAVFYGYWAYLRYLQTTQSNVLI
PSYRNTQ

Sequences:

>Translated_327_residues
MSQSHTLPPALTGDKSHLSEQARKEIQALSGARPKEFFLQALGAWIVIIATIMLATHLDTIWMTLLALPIIATRFNILGL
LAHEQVHQLGLRGRYGDTVANILTAYPIGITVEDYARVHLSHHKYYFTKDDPDFLRKSGPDWTFPMPTLHLTKLLLSDLC
GLSFYRILQGKRLENKQIYKRLYPAPKWLRSAFYIGLAILLTYFELWPAFLVYWLLPLMTFTPLIVRLGAVCEHVYNLPQ
ASIAESSPLIILRWWEKLLLPNLNFALHTYHHFFPGIAWCNLPKAHEIFKRENLINEKAVFYGYWAYLRYLQTTQSNVLI
PSYRNTQ
>Mature_326_residues
SQSHTLPPALTGDKSHLSEQARKEIQALSGARPKEFFLQALGAWIVIIATIMLATHLDTIWMTLLALPIIATRFNILGLL
AHEQVHQLGLRGRYGDTVANILTAYPIGITVEDYARVHLSHHKYYFTKDDPDFLRKSGPDWTFPMPTLHLTKLLLSDLCG
LSFYRILQGKRLENKQIYKRLYPAPKWLRSAFYIGLAILLTYFELWPAFLVYWLLPLMTFTPLIVRLGAVCEHVYNLPQA
SIAESSPLIILRWWEKLLLPNLNFALHTYHHFFPGIAWCNLPKAHEIFKRENLINEKAVFYGYWAYLRYLQTTQSNVLIP
SYRNTQ

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37866; Mature: 37735

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSHTLPPALTGDKSHLSEQARKEIQALSGARPKEFFLQALGAWIVIIATIMLATHLDT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWMTLLALPIIATRFNILGLLAHEQVHQLGLRGRYGDTVANILTAYPIGITVEDYARVHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
SHHKYYFTKDDPDFLRKSGPDWTFPMPTLHLTKLLLSDLCGLSFYRILQGKRLENKQIYK
HHCEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLYPAPKWLRSAFYIGLAILLTYFELWPAFLVYWLLPLMTFTPLIVRLGAVCEHVYNLPQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASIAESSPLIILRWWEKLLLPNLNFALHTYHHFFPGIAWCNLPKAHEIFKRENLINEKAV
HHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHH
FYGYWAYLRYLQTTQSNVLIPSYRNTQ
HHHHHHHHHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure 
SQSHTLPPALTGDKSHLSEQARKEIQALSGARPKEFFLQALGAWIVIIATIMLATHLDT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWMTLLALPIIATRFNILGLLAHEQVHQLGLRGRYGDTVANILTAYPIGITVEDYARVHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
SHHKYYFTKDDPDFLRKSGPDWTFPMPTLHLTKLLLSDLCGLSFYRILQGKRLENKQIYK
HHCEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLYPAPKWLRSAFYIGLAILLTYFELWPAFLVYWLLPLMTFTPLIVRLGAVCEHVYNLPQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASIAESSPLIILRWWEKLLLPNLNFALHTYHHFFPGIAWCNLPKAHEIFKRENLINEKAV
HHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHH
FYGYWAYLRYLQTTQSNVLIPSYRNTQ
HHHHHHHHHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA