Click here to switch to the map view.

The map label for this gene is pchF [H]

Identifier: 114330650

GI number: 114330650

Start: 646072

End: 647667

Strand: Direct

Name: pchF [H]

Synonym: Neut_0635

Alternate gene names: 114330650

Gene position: 646072-647667 (Clockwise)

Preceding gene: 114330648

Following gene: 114330651

Centisome position: 24.28

GC content: 46.8

Gene sequence:

>1596_bases
ATGAAATTAGATAGCGCTCTTAGAGAATGGACAAAATTAGTTGGTCAATCCCGTGTTTTAAGTGGCGAGGATGCACAAAT
AAATTATGGTCGTTGTACTACCGGGGAAAGTAGAAGACTTGCCGGGATCCTCAAGCCACTTGAGCGCGATCATATTATTC
CAATTGTAAAGATTTCTGCGCAGTATAAAGTGCCCCTTTATCCTGTAAGTACAGGCCATAACTGGGGTTATGGTACAGCC
CTGCCGCCCATTGACGATTGCGTAATTCTTGATCTTTCAGAACTAAACAAAATTGTTGATTTTGATGCTGAAGCTGGGGT
GGTAACTGTTGAGCCAGGTGTAACGCAAGGACAGCTGGCAGAGTTTCTCGATCAGGGAGAATACCCTTTCATGGTGCCGG
TAACCGGCGCCGGGCCAACTTGCAGCATACTGGGTAACGCTCTGGAGCGTGGCTATGGGATTACACCTCATACAGATCAT
TTTGGTGCAGTTATGGCTATTCAGGCTGTATTGGCTGATGGCAGTATTTATCATTCGGCCCATGTCGGTCTGGGTGGTGA
GCAACTAGATCGGCTATTTAAATGGGGAATAGGCCCCTATCTTGATGGCCTCTTTTCCCAGGGCGGCTTTGGAGTTGTCA
CGCAGATGACTATTGTTCTGGCCAGACGCCCTGAAAAGGTTTGCTCTTTTTTATTCGGCTTAAAACAGCCGGAACAATTG
GGTGAGCTAGTTCTGCGTGTTCGTGAGGTGATTGCGCGCTACCCCGGTATTGTCGGAGGGGTCAATCTGATGAATGCGCA
TCGTGTGCTGGCAATGACCGCACCTTATCCAAGGAATCGAGTGACAGCAGGGGGAACTATTTCTCCTGAGGTCTTGCATG
GATTATGTCAAGATAATCTGGTGCTGCCATGGACAGGGTTTGGAACGCTGTATGGCTCTAAAGGCGTGGTAAAGGCAGCA
CAGCGGGAAATACGCTCTATTTTATCCCCTTTGGCAGTACGTTTACTATTTGTTGACTCCCGGCGTATCCAGGTATTGTT
CCAGATCGGGAAATTGTTGCCACCTGGTTTTCGTTCCAGGTTAAGCAAAAAACTGATGATACTTGAACGCTCGTTGCAGC
TGGTTGCAGGTTGCCCAAACCAGACTGCTTTGCCGCTTTGCTACTGGCTTAAAAATAATTTGCGACATGATTCTGTGATG
AATCCCGCACAGGATGGTTGCGGCTTGACCTGGTACGCACCGCTTGTCCCTATGAAACAGGAAATCGTGATTCATTACGT
GCAAATGGTTTCCGCTATTATGGATAAGTACCGGCTGGAACCATTGATAACACTAACTAGCCTTTCAGACCGATGTTTTG
ATAGTACCGTCCCTTTATTATTTGATCCGGATTCCGAGGCAGAGCGGAAAAATGCAGAAAATTGCTACTGGGAATTGTTG
GAAGAAGGAAAGAAACAGGGATTTTTACCTTACAGGGTAGGTATACAGACGATGAGCTGGCTGTCAGAAAATAATAGTTC
CTATTGGCAAACCGTGCGTAAAGTCAAGAATGTGCTTGATCCGGATGCTGTCATTTCCCCGGGTAGATATATTTAA

Upstream 100 bases:

>100_bases
CAGATAAAGTCATGTTTTTGTATTAATTATAAAATCATCAGATATTTAATAAACTTGCAAATACATAACTATATTTACAG
GTTGCTACCGGGTTAATTGA

Downstream 100 bases:

>100_bases
GGTTGGTAGAGATAAAGTGATGTCGATAAATTTTACAATTAGGGTAATTAGAAATAAAACATAGAATAATTATTTATTAA
TATCATGATGTTATGTTGAA

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: P-cresol methylhydroxylase; PCMH [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKLDSALREWTKLVGQSRVLSGEDAQINYGRCTTGESRRLAGILKPLERDHIIPIVKISAQYKVPLYPVSTGHNWGYGTA
LPPIDDCVILDLSELNKIVDFDAEAGVVTVEPGVTQGQLAEFLDQGEYPFMVPVTGAGPTCSILGNALERGYGITPHTDH
FGAVMAIQAVLADGSIYHSAHVGLGGEQLDRLFKWGIGPYLDGLFSQGGFGVVTQMTIVLARRPEKVCSFLFGLKQPEQL
GELVLRVREVIARYPGIVGGVNLMNAHRVLAMTAPYPRNRVTAGGTISPEVLHGLCQDNLVLPWTGFGTLYGSKGVVKAA
QREIRSILSPLAVRLLFVDSRRIQVLFQIGKLLPPGFRSRLSKKLMILERSLQLVAGCPNQTALPLCYWLKNNLRHDSVM
NPAQDGCGLTWYAPLVPMKQEIVIHYVQMVSAIMDKYRLEPLITLTSLSDRCFDSTVPLLFDPDSEAERKNAENCYWELL
EEGKKQGFLPYRVGIQTMSWLSENNSSYWQTVRKVKNVLDPDAVISPGRYI

Sequences:

>Translated_531_residues
MKLDSALREWTKLVGQSRVLSGEDAQINYGRCTTGESRRLAGILKPLERDHIIPIVKISAQYKVPLYPVSTGHNWGYGTA
LPPIDDCVILDLSELNKIVDFDAEAGVVTVEPGVTQGQLAEFLDQGEYPFMVPVTGAGPTCSILGNALERGYGITPHTDH
FGAVMAIQAVLADGSIYHSAHVGLGGEQLDRLFKWGIGPYLDGLFSQGGFGVVTQMTIVLARRPEKVCSFLFGLKQPEQL
GELVLRVREVIARYPGIVGGVNLMNAHRVLAMTAPYPRNRVTAGGTISPEVLHGLCQDNLVLPWTGFGTLYGSKGVVKAA
QREIRSILSPLAVRLLFVDSRRIQVLFQIGKLLPPGFRSRLSKKLMILERSLQLVAGCPNQTALPLCYWLKNNLRHDSVM
NPAQDGCGLTWYAPLVPMKQEIVIHYVQMVSAIMDKYRLEPLITLTSLSDRCFDSTVPLLFDPDSEAERKNAENCYWELL
EEGKKQGFLPYRVGIQTMSWLSENNSSYWQTVRKVKNVLDPDAVISPGRYI
>Mature_531_residues
MKLDSALREWTKLVGQSRVLSGEDAQINYGRCTTGESRRLAGILKPLERDHIIPIVKISAQYKVPLYPVSTGHNWGYGTA
LPPIDDCVILDLSELNKIVDFDAEAGVVTVEPGVTQGQLAEFLDQGEYPFMVPVTGAGPTCSILGNALERGYGITPHTDH
FGAVMAIQAVLADGSIYHSAHVGLGGEQLDRLFKWGIGPYLDGLFSQGGFGVVTQMTIVLARRPEKVCSFLFGLKQPEQL
GELVLRVREVIARYPGIVGGVNLMNAHRVLAMTAPYPRNRVTAGGTISPEVLHGLCQDNLVLPWTGFGTLYGSKGVVKAA
QREIRSILSPLAVRLLFVDSRRIQVLFQIGKLLPPGFRSRLSKKLMILERSLQLVAGCPNQTALPLCYWLKNNLRHDSVM
NPAQDGCGLTWYAPLVPMKQEIVIHYVQMVSAIMDKYRLEPLITLTSLSDRCFDSTVPLLFDPDSEAERKNAENCYWELL
EEGKKQGFLPYRVGIQTMSWLSENNSSYWQTVRKVKNVLDPDAVISPGRYI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016170
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: =1.17.99.1 [H]

Molecular weight: Translated: 58751; Mature: 58751

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDSALREWTKLVGQSRVLSGEDAQINYGRCTTGESRRLAGILKPLERDHIIPIVKISA
CCHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
QYKVPLYPVSTGHNWGYGTALPPIDDCVILDLSELNKIVDFDAEAGVVTVEPGVTQGQLA
EEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEECCCCCHHHHH
EFLDQGEYPFMVPVTGAGPTCSILGNALERGYGITPHTDHFGAVMAIQAVLADGSIYHSA
HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
HVGLGGEQLDRLFKWGIGPYLDGLFSQGGFGVVTQMTIVLARRPEKVCSFLFGLKQPEQL
ECCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
GELVLRVREVIARYPGIVGGVNLMNAHRVLAMTAPYPRNRVTAGGTISPEVLHGLCQDNL
HHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCE
VLPWTGFGTLYGSKGVVKAAQREIRSILSPLAVRLLFVDSRRIQVLFQIGKLLPPGFRSR
EEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
LSKKLMILERSLQLVAGCPNQTALPLCYWLKNNLRHDSVMNPAQDGCGLTWYAPLVPMKQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHH
EIVIHYVQMVSAIMDKYRLEPLITLTSLSDRCFDSTVPLLFDPDSEAERKNAENCYWELL
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEECCCCHHHHCCHHHHHHHHH
EEGKKQGFLPYRVGIQTMSWLSENNSSYWQTVRKVKNVLDPDAVISPGRYI
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKLDSALREWTKLVGQSRVLSGEDAQINYGRCTTGESRRLAGILKPLERDHIIPIVKISA
CCHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
QYKVPLYPVSTGHNWGYGTALPPIDDCVILDLSELNKIVDFDAEAGVVTVEPGVTQGQLA
EEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEECCCCCHHHHH
EFLDQGEYPFMVPVTGAGPTCSILGNALERGYGITPHTDHFGAVMAIQAVLADGSIYHSA
HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
HVGLGGEQLDRLFKWGIGPYLDGLFSQGGFGVVTQMTIVLARRPEKVCSFLFGLKQPEQL
ECCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
GELVLRVREVIARYPGIVGGVNLMNAHRVLAMTAPYPRNRVTAGGTISPEVLHGLCQDNL
HHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCE
VLPWTGFGTLYGSKGVVKAAQREIRSILSPLAVRLLFVDSRRIQVLFQIGKLLPPGFRSR
EEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
LSKKLMILERSLQLVAGCPNQTALPLCYWLKNNLRHDSVMNPAQDGCGLTWYAPLVPMKQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHH
EIVIHYVQMVSAIMDKYRLEPLITLTSLSDRCFDSTVPLLFDPDSEAERKNAENCYWELL
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEECCCCHHHHCCHHHHHHHHH
EEGKKQGFLPYRVGIQTMSWLSENNSSYWQTVRKVKNVLDPDAVISPGRYI
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]