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The map label for this gene is 114330640

Identifier: 114330640

GI number: 114330640

Start: 635826

End: 636770

Strand: Reverse

Name: 114330640

Synonym: Neut_0625

Alternate gene names: NA

Gene position: 636770-635826 (Counterclockwise)

Preceding gene: 114330641

Following gene: 114330639

Centisome position: 23.93

GC content: 48.15

Gene sequence:

>945_bases
GTGGCGGTGCGTCGAGCGATACAAAATAGTCAAGAGAGTCTGAATGTTCTGGCCAAGCGGCATGGGATTAATCCAAAAAC
GGTAGCGAAGTGGCGGAAGCGGGAATTCACCCACGATGCACCGATGGGCCCCAAAGAGTCGCACTCGACTGTTTTAAGTC
TGGAAGAAGAAGCCGCTGTTGTGGCGTTTCGCAAACATACGCTTCTACCGCTGGATGATTGTCTATATGCCTTGCAACCA
AGCATTCCGCATTTAACCCGCTCAAGCCTGCATCGCTGCTTTCAACGGCATGGCATCAGTCGGTTGCCGGAGGCTGATGG
TGACAAGCCAAAGAAAAAGTTTAATGCCTATCCAATTGGCTACTTCCATATTGATATTGCCGAAGTTCGTACGAAGGAAG
GTAAACTCTATCTTTTTGTAGCCATTGACCGGACATCAAAGTTCGTTTTTGTTCAACTCCAGAACAAAGCCAACCGCAAC
ACGGCAACCGCCTTCTTGAAGGCCGTGATCGAGACTGTTCCCTACAAGATCCATACAATCCTGACTGATAACGGTATCCA
GTTTACGTTCCCGGCGCGTTATCGGAATGGGCCAACGGCTCAGTATGTAACGCATATGTTCGATAGGTGTTGTCAGATCA
ACGGCATCGAGCACCGTCTCACCAAACCCAACCATCCCTGGACCAATGGTCAGGTTGAACGCATGAATCGAACCATCAAG
GATGCGACTGTAAAACGGTATTATTACGACTCACACGATCAGTTGAAGGCCCATCTCCATCGCTTTGTGATGGCTTATAA
CTTCGCCAAAAGACTAAAAGCTCTCAAAGGCCTAACACCCTATGAATACATCTGCAAAATCTGGAAAAATGAGCCAGATC
GTTTTATCTTTGATCCATTCCAGCACACCGTGGGACTAAACAACCTAGGCCACGCATCAATCTGA

Upstream 100 bases:

>100_bases
ACACTAGTTGTTTAGTCCCACGGTGTGCCGGTGTAACATATAACCAGCTACGGAGGGATGATTTATGGGACAGATATTAC
ACGGAAGCGCCCGCACGACA

Downstream 100 bases:

>100_bases
TACATGCAAAAGCTATAACGTAGCTCTATTCCATTCTCTTTATTTGCAATCCCCTCTACCACTCATCCTTCAGCATTAAT
CTTCCTGCACCAGGCGATCT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Transposase And Inactivated Derivatives; Instegrase; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Transposase For ISMyma; Noncomposite Transposon Transposase; Hypothethical Protein Transposase; Transposase Of

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQP
SIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRN
TATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIK
DATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLGHASI

Sequences:

>Translated_314_residues
MAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQP
SIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRN
TATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIK
DATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLGHASI
>Mature_313_residues
AVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPS
IPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNT
ATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKD
ATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLGHASI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36398; Mature: 36267

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAV
CCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH
VAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIG
EEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEE
YFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTI
EEEEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEE
LTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIK
EECCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHH
DATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPF
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECHH
QHTVGLNNLGHASI
HHHCCCCCCCCCCC
>Mature Secondary Structure 
AVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAV
CHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH
VAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIG
EEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEE
YFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTI
EEEEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEE
LTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIK
EECCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHH
DATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPF
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECHH
QHTVGLNNLGHASI
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA