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The map label for this gene is ctb [H]

Identifier: 114330635

GI number: 114330635

Start: 631238

End: 631642

Strand: Direct

Name: ctb [H]

Synonym: Neut_0620

Alternate gene names: 114330635

Gene position: 631238-631642 (Clockwise)

Preceding gene: 114330618

Following gene: 114330636

Centisome position: 23.72

GC content: 49.38

Gene sequence:

>405_bases
ATGCCTGATCCTACGTTGTGTACTGAGGAAGATATCACACGCCTGATCCACGCTTTTTATACCCGGGTACGGGATGATGA
AGCACTTGGTCCCATTTTCGACGCACATATTGATGACTGGAGCCTCCATCTGACCAGAATGGTGGATTTTTGGTCATCTA
TTTTGCGCGGTACTGATCGTTTTAGTGGTACGCCAATGCCCAAACATATAGCCCTGCCTGATCTGAATGCAGAGCTGTTT
CAGCGCTGGCTCAAGCTGTTCCATAAAACCGCTGCTGAACAATCGAATCAGGCCATGGCTGAACAGATTTGTATGATGGC
TGATCGCATCGCCCGCAGTCTGTGGATGGGTTATCAGATCAGTCATCATCCTGAGGTGATGCCTGTGGGGTTGCCTCATG
GTTGA

Upstream 100 bases:

>100_bases
ACCTTGATGAGGATTACTGATGGTCTGGCTTGCTGAGGTACTCAAATATAAGATACACTCAAAATCAATCTTATAAATAC
TCTGCTCAGGAGAAGTATTC

Downstream 100 bases:

>100_bases
GTCATCACAAATCAGGAAGCAGCTGCCAGCGCCGCAATGGGCTGCTTTCCTCAGCCTGGGCTTTCGGCCACTGTATATTG
CAGGCTGTTTCTGGGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPDPTLCTEEDITRLIHAFYTRVRDDEALGPIFDAHIDDWSLHLTRMVDFWSSILRGTDRFSGTPMPKHIALPDLNAELF
QRWLKLFHKTAAEQSNQAMAEQICMMADRIARSLWMGYQISHHPEVMPVGLPHG

Sequences:

>Translated_134_residues
MPDPTLCTEEDITRLIHAFYTRVRDDEALGPIFDAHIDDWSLHLTRMVDFWSSILRGTDRFSGTPMPKHIALPDLNAELF
QRWLKLFHKTAAEQSNQAMAEQICMMADRIARSLWMGYQISHHPEVMPVGLPHG
>Mature_133_residues
PDPTLCTEEDITRLIHAFYTRVRDDEALGPIFDAHIDDWSLHLTRMVDFWSSILRGTDRFSGTPMPKHIALPDLNAELFQ
RWLKLFHKTAAEQSNQAMAEQICMMADRIARSLWMGYQISHHPEVMPVGLPHG

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15457; Mature: 15326

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPTLCTEEDITRLIHAFYTRVRDDEALGPIFDAHIDDWSLHLTRMVDFWSSILRGTDR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FSGTPMPKHIALPDLNAELFQRWLKLFHKTAAEQSNQAMAEQICMMADRIARSLWMGYQI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHHPEVMPVGLPHG
CCCCCEECCCCCCC
>Mature Secondary Structure 
PDPTLCTEEDITRLIHAFYTRVRDDEALGPIFDAHIDDWSLHLTRMVDFWSSILRGTDR
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FSGTPMPKHIALPDLNAELFQRWLKLFHKTAAEQSNQAMAEQICMMADRIARSLWMGYQI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHHPEVMPVGLPHG
CCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]