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The map label for this gene is rnfH [H]

Identifier: 114330600

GI number: 114330600

Start: 594297

End: 594614

Strand: Reverse

Name: rnfH [H]

Synonym: Neut_0585

Alternate gene names: 114330600

Gene position: 594614-594297 (Counterclockwise)

Preceding gene: 114330601

Following gene: 114330562

Centisome position: 22.35

GC content: 35.85

Gene sequence:

>318_bases
ATGGACCCAGTATTTAGGAAGGATTTTATTATCATAGAGATAGTCGCTGCACTGACCGAACGACATTTTATCAAACGACT
TCAAGTTCCAAAAGGAACTTTAATTAATCAAGCAATTAAACTTGCAGAAATGAAAGAGTTCTATCCTGAGATCGATTGCT
CAACTCTTAAAATAGGGATTTATGGAAAAGTGGCCTGCTCAGAAACTGTGCTCCAGCAAAACGATCGCATTGAAATTTAC
AGACCTTTAATCTCAGATCCCAAAGAAAAACGCAAGCTGAAAATCAAGTCAGAATATAATAAAATAAGGAGATCATGA

Upstream 100 bases:

>100_bases
ACATTTTCTCACAAACTTTTAGAAAAGCTGATCGGTCCAGTATTTTACATAATAGCCAATAGTTTTGTAGAAGCTTTCGT
GGAACGAGCGGAAGAGATTT

Downstream 100 bases:

>100_bases
TCCCAATAGCTTTTTATGCTAATTTCAATCAGTTAAAAATCAACTAACAGAATCATGGTGCCGCAGAGAGGAGTCGAACC
TCCGACTTGCTGATTACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDPVFRKDFIIIEIVAALTERHFIKRLQVPKGTLINQAIKLAEMKEFYPEIDCSTLKIGIYGKVACSETVLQQNDRIEIY
RPLISDPKEKRKLKIKSEYNKIRRS

Sequences:

>Translated_105_residues
MDPVFRKDFIIIEIVAALTERHFIKRLQVPKGTLINQAIKLAEMKEFYPEIDCSTLKIGIYGKVACSETVLQQNDRIEIY
RPLISDPKEKRKLKIKSEYNKIRRS
>Mature_105_residues
MDPVFRKDFIIIEIVAALTERHFIKRLQVPKGTLINQAIKLAEMKEFYPEIDCSTLKIGIYGKVACSETVLQQNDRIEIY
RPLISDPKEKRKLKIKSEYNKIRRS

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=92, Percent_Identity=35.8695652173913, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 12324; Mature: 12324

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVFRKDFIIIEIVAALTERHFIKRLQVPKGTLINQAIKLAEMKEFYPEIDCSTLKIGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
YGKVACSETVLQQNDRIEIYRPLISDPKEKRKLKIKSEYNKIRRS
CCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHEHHHHHHHHHCCC
>Mature Secondary Structure
MDPVFRKDFIIIEIVAALTERHFIKRLQVPKGTLINQAIKLAEMKEFYPEIDCSTLKIGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
YGKVACSETVLQQNDRIEIYRPLISDPKEKRKLKIKSEYNKIRRS
CCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA