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The map label for this gene is tapC [H]

Identifier: 114330526

GI number: 114330526

Start: 526697

End: 527881

Strand: Direct

Name: tapC [H]

Synonym: Neut_0507

Alternate gene names: 114330526

Gene position: 526697-527881 (Clockwise)

Preceding gene: 114330525

Following gene: 114330527

Centisome position: 19.79

GC content: 53.42

Gene sequence:

>1185_bases
ATGCGCTACACAGTAAAAGCTTTACTGACCGGAAAAGGCGCTGTGCTGCTTGAACTTGAGGCGGCCAGCGAAGCCGATGT
TCGCAATCAGATTAGCGCCCAGGGTGGCGTGGTACTGAGTATCCGGCGGAATTTCTCAAGCTTGTTTTCCAGGCCGCGTT
CGCGGTTTCCGTTATCTAATTTCTCCCAGGAACTGCTTGCCTTGCTGACAGCCGGCCTGAATCTGGTGGAGGGGATTGAA
ACCCTGGTTGAGAAAGAAGAAGACAGTGCGGTGCGCGAATTGCTGCAGCAGATATTGGTGCGATTGCATGAGGGGATGAC
ACTCTCGCGTGCTCTGGAATCTCATCCGCAAACATTTCCGCCGCTGTACGTCGCCACGATTCGCGCCAGCGAGCAAACGG
GAGATCTGGCAGAAGCGCTGACACGTTATCTGACTTACCAGTCACAAATGGATCTGGTTCGCAAGAAACTGGTGGGTGCA
TCCATCTATCCGGTTTTGCTGCTGGTGCTGGGGGGGCTGGTGGCCATTTTTCTGTTGGTGTTTGTTGTGCCAAAATTCAG
TGCCATCTATGAAGATATGAGTACGGATCTGCCCTGGATGTCCATGCTGTTAATCGAATGGGGGCATCTGGTGCAAAAAA
ACGGCTGGATGCTGGCAGGCGTTGTAACGGTTATGCTGGCCGCCGTGTTTTACACACTTTCACAACCGCAAGTTCGGGCG
CACCTGTTGCAAGCGCTATGGCGTATTCCGGCAATTGGCGAGCGGATGCGGGTTTACCAGCTTGCCCGTTTCTATAAAAC
GCTGGGCATGTTGCTGCGTGGCGGGATTCCCGTGACACAGGCGCTGGAAATGGTCAGTGATCTGTTGCAACCACATTTTC
GTCCCCGCGTAAAAATTGCCGCAACACTGATTCGTGAAGGTAGCACTATTTCCAGTGCGATGCAGCGTGCAGAACTGACT
ACTGCAGTGGGCAGCCGCATGTTGCGGGTGGGTGAGCGTACCGGCATGATGGGCGACATGATGGAGCGTATCGGCAATTT
TCACGATGAAGAAATCGGGCGCTGGGTTGAGTGGACCACCAAACTGATCGAGCCGCTGTTGATGGCAGTAATCGGAACTG
TCATCGGCGGTATCATCATTCTCATGTATCTGCCAATTTTTGAGCTGGCCGGGAGTATCAATTGA

Upstream 100 bases:

>100_bases
GAGTGATTTTGATTTGTTCTCATTTGGTAAGGACGGTCAGCCAGGTGGTAGCGGTGAGGATGCGGATATCACCAACTGGT
AGCCGTATTCAATCCCATTG

Downstream 100 bases:

>100_bases
CGCAGACGCAGGTCGCCCTGCTGGACCAACCGGTAATTGATGCAGCCCAACTTCGCCAGGCACGGGAGCAGGCTGTCATC
CATGGTACGTCGCTGATCAA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRYTVKALLTGKGAVLLELEAASEADVRNQISAQGGVVLSIRRNFSSLFSRPRSRFPLSNFSQELLALLTAGLNLVEGIE
TLVEKEEDSAVRELLQQILVRLHEGMTLSRALESHPQTFPPLYVATIRASEQTGDLAEALTRYLTYQSQMDLVRKKLVGA
SIYPVLLLVLGGLVAIFLLVFVVPKFSAIYEDMSTDLPWMSMLLIEWGHLVQKNGWMLAGVVTVMLAAVFYTLSQPQVRA
HLLQALWRIPAIGERMRVYQLARFYKTLGMLLRGGIPVTQALEMVSDLLQPHFRPRVKIAATLIREGSTISSAMQRAELT
TAVGSRMLRVGERTGMMGDMMERIGNFHDEEIGRWVEWTTKLIEPLLMAVIGTVIGGIIILMYLPIFELAGSIN

Sequences:

>Translated_394_residues
MRYTVKALLTGKGAVLLELEAASEADVRNQISAQGGVVLSIRRNFSSLFSRPRSRFPLSNFSQELLALLTAGLNLVEGIE
TLVEKEEDSAVRELLQQILVRLHEGMTLSRALESHPQTFPPLYVATIRASEQTGDLAEALTRYLTYQSQMDLVRKKLVGA
SIYPVLLLVLGGLVAIFLLVFVVPKFSAIYEDMSTDLPWMSMLLIEWGHLVQKNGWMLAGVVTVMLAAVFYTLSQPQVRA
HLLQALWRIPAIGERMRVYQLARFYKTLGMLLRGGIPVTQALEMVSDLLQPHFRPRVKIAATLIREGSTISSAMQRAELT
TAVGSRMLRVGERTGMMGDMMERIGNFHDEEIGRWVEWTTKLIEPLLMAVIGTVIGGIIILMYLPIFELAGSIN
>Mature_394_residues
MRYTVKALLTGKGAVLLELEAASEADVRNQISAQGGVVLSIRRNFSSLFSRPRSRFPLSNFSQELLALLTAGLNLVEGIE
TLVEKEEDSAVRELLQQILVRLHEGMTLSRALESHPQTFPPLYVATIRASEQTGDLAEALTRYLTYQSQMDLVRKKLVGA
SIYPVLLLVLGGLVAIFLLVFVVPKFSAIYEDMSTDLPWMSMLLIEWGHLVQKNGWMLAGVVTVMLAAVFYTLSQPQVRA
HLLQALWRIPAIGERMRVYQLARFYKTLGMLLRGGIPVTQALEMVSDLLQPHFRPRVKIAATLIREGSTISSAMQRAELT
TAVGSRMLRVGERTGMMGDMMERIGNFHDEEIGRWVEWTTKLIEPLLMAVIGTVIGGIIILMYLPIFELAGSIN

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=398, Percent_Identity=25.8793969849246, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1786295, Length=340, Percent_Identity=29.1176470588235, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43929; Mature: 43929

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTVKALLTGKGAVLLELEAASEADVRNQISAQGGVVLSIRRNFSSLFSRPRSRFPLSN
CCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCHHH
FSQELLALLTAGLNLVEGIETLVEKEEDSAVRELLQQILVRLHEGMTLSRALESHPQTFP
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PLYVATIRASEQTGDLAEALTRYLTYQSQMDLVRKKLVGASIYPVLLLVLGGLVAIFLLV
CHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVVPKFSAIYEDMSTDLPWMSMLLIEWGHLVQKNGWMLAGVVTVMLAAVFYTLSQPQVRA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH
HLLQALWRIPAIGERMRVYQLARFYKTLGMLLRGGIPVTQALEMVSDLLQPHFRPRVKIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
ATLIREGSTISSAMQRAELTTAVGSRMLRVGERTGMMGDMMERIGNFHDEEIGRWVEWTT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH
KLIEPLLMAVIGTVIGGIIILMYLPIFELAGSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRYTVKALLTGKGAVLLELEAASEADVRNQISAQGGVVLSIRRNFSSLFSRPRSRFPLSN
CCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCHHH
FSQELLALLTAGLNLVEGIETLVEKEEDSAVRELLQQILVRLHEGMTLSRALESHPQTFP
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PLYVATIRASEQTGDLAEALTRYLTYQSQMDLVRKKLVGASIYPVLLLVLGGLVAIFLLV
CHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVVPKFSAIYEDMSTDLPWMSMLLIEWGHLVQKNGWMLAGVVTVMLAAVFYTLSQPQVRA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH
HLLQALWRIPAIGERMRVYQLARFYKTLGMLLRGGIPVTQALEMVSDLLQPHFRPRVKIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
ATLIREGSTISSAMQRAELTTAVGSRMLRVGERTGMMGDMMERIGNFHDEEIGRWVEWTT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH
KLIEPLLMAVIGTVIGGIIILMYLPIFELAGSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]