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The map label for this gene is yfiH [C]

Identifier: 114330482

GI number: 114330482

Start: 476310

End: 477068

Strand: Direct

Name: yfiH [C]

Synonym: Neut_0462

Alternate gene names: 114330482

Gene position: 476310-477068 (Clockwise)

Preceding gene: 114330481

Following gene: 114330483

Centisome position: 17.9

GC content: 48.35

Gene sequence:

>759_bases
ATGATTGATAGGATTGTACCGGACTGGCCTTCTCCCGCAAATGTTCGCGCCATGTTTACCACCCGTAATGTTGGGAGGGT
TACGACTGAAAAAAGAGCTTACACTGGCTTGAATCTGGCGGTTCATGTTGATGATAATCCACACGTTGTTCAACTAAATC
GAAACCAGTTGCGTCAATATTTACCCGATCATCCCCGCTGGTTGACCCAGGTTCATGGTTCCAGGGCAATTTGGGTAGAT
TCTGATAGTGAAGCGCTGGAGGGGGATGCTGCAATGAGCCGATATCCCGGAGTGGTATGTGCAGTTCTGGTGGCGGATTG
TCTCCCGGTATTATTGTGTGACATGGCAGGTAGTGTAGTGGGCGTTGCCCATGCCGGGTGGCGTGGGTTGGCCAAGGGAA
TTATCGAAAACACAGTTCAGGCATTACGCGAATTCAGCCATAGTGATCAAATAATCGCATGGCTTGGTCCGGCAATCAGT
TCACAGCACTTTGAAGTCGGTGACGAGGTGCGAACGACATTTACCGAGTATGATTGTCAGGCAGCGCGGGCATTTTTTCC
AGGAAAAGAAAAAGGAAAATGGTATGCAGATCTTTTTGAACTGGCACGCCAAAGGCTGTCTCATGCCGGGGTCTCCCAAA
TCTATGGTGGTAATTTGTGTACGTACAGCAATCCTGAAAAGTTTTATTCGTACCGTCGTGATGGTAAAACGGGAAGGATG
GCTGGTTTATTGTGGATGACGCAGTTTCCTGATAAGTAA

Upstream 100 bases:

>100_bases
CCGGGTTTGTGAGACCTTCTCTAAACTGTATCCAGCTGTGACGCAGTGAGTGGATGCGATTACTAAATTTAGATCCTGTA
ATGACAAGAATTCTTGGTTA

Downstream 100 bases:

>100_bases
TTCTTGTTTAATACCCGCCAAGATGGGAGCATGTGAAGTAACACGCCTGTTTTACAGTTCCTGAGCATGGATTTACCTAA
AAGATCTTGACGAATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIDRIVPDWPSPANVRAMFTTRNVGRVTTEKRAYTGLNLAVHVDDNPHVVQLNRNQLRQYLPDHPRWLTQVHGSRAIWVD
SDSEALEGDAAMSRYPGVVCAVLVADCLPVLLCDMAGSVVGVAHAGWRGLAKGIIENTVQALREFSHSDQIIAWLGPAIS
SQHFEVGDEVRTTFTEYDCQAARAFFPGKEKGKWYADLFELARQRLSHAGVSQIYGGNLCTYSNPEKFYSYRRDGKTGRM
AGLLWMTQFPDK

Sequences:

>Translated_252_residues
MIDRIVPDWPSPANVRAMFTTRNVGRVTTEKRAYTGLNLAVHVDDNPHVVQLNRNQLRQYLPDHPRWLTQVHGSRAIWVD
SDSEALEGDAAMSRYPGVVCAVLVADCLPVLLCDMAGSVVGVAHAGWRGLAKGIIENTVQALREFSHSDQIIAWLGPAIS
SQHFEVGDEVRTTFTEYDCQAARAFFPGKEKGKWYADLFELARQRLSHAGVSQIYGGNLCTYSNPEKFYSYRRDGKTGRM
AGLLWMTQFPDK
>Mature_252_residues
MIDRIVPDWPSPANVRAMFTTRNVGRVTTEKRAYTGLNLAVHVDDNPHVVQLNRNQLRQYLPDHPRWLTQVHGSRAIWVD
SDSEALEGDAAMSRYPGVVCAVLVADCLPVLLCDMAGSVVGVAHAGWRGLAKGIIENTVQALREFSHSDQIIAWLGPAIS
SQHFEVGDEVRTTFTEYDCQAARAFFPGKEKGKWYADLFELARQRLSHAGVSQIYGGNLCTYSNPEKFYSYRRDGKTGRM
AGLLWMTQFPDK

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=177, Percent_Identity=29.9435028248588, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI190194372, Length=177, Percent_Identity=29.9435028248588, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI1788945, Length=249, Percent_Identity=47.3895582329317, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28214; Mature: 28214

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRIVPDWPSPANVRAMFTTRNVGRVTTEKRAYTGLNLAVHVDDNPHVVQLNRNQLRQY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCEEEECHHHHHHH
LPDHPRWLTQVHGSRAIWVDSDSEALEGDAAMSRYPGVVCAVLVADCLPVLLCDMAGSVV
CCCCCHHHHHHCCCEEEEECCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
GVAHAGWRGLAKGIIENTVQALREFSHSDQIIAWLGPAISSQHFEVGDEVRTTFTEYDCQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHH
AARAFFPGKEKGKWYADLFELARQRLSHAGVSQIYGGNLCTYSNPEKFYSYRRDGKTGRM
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH
AGLLWMTQFPDK
HHEEEECCCCCC
>Mature Secondary Structure
MIDRIVPDWPSPANVRAMFTTRNVGRVTTEKRAYTGLNLAVHVDDNPHVVQLNRNQLRQY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCEEEECHHHHHHH
LPDHPRWLTQVHGSRAIWVDSDSEALEGDAAMSRYPGVVCAVLVADCLPVLLCDMAGSVV
CCCCCHHHHHHCCCEEEEECCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
GVAHAGWRGLAKGIIENTVQALREFSHSDQIIAWLGPAISSQHFEVGDEVRTTFTEYDCQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHH
AARAFFPGKEKGKWYADLFELARQRLSHAGVSQIYGGNLCTYSNPEKFYSYRRDGKTGRM
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH
AGLLWMTQFPDK
HHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 8097014 [H]