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The map label for this gene is glcF [H]

Identifier: 114330466

GI number: 114330466

Start: 456800

End: 458080

Strand: Direct

Name: glcF [H]

Synonym: Neut_0446

Alternate gene names: 114330466

Gene position: 456800-458080 (Clockwise)

Preceding gene: 114330461

Following gene: 114330467

Centisome position: 17.17

GC content: 46.6

Gene sequence:

>1281_bases
ATGAAAAATTCAGATCATAGTTATTACTTGATTAAAGAGCTACTTGCAGAGGCCAATCGTTGCGTGGCATGTGGATTGTG
TTTGCCGCATTGTCCTACTTATCACCTGACGCATTCCGAGGCGGATTCTCCGCGAGGACGTATTGCACTGATGAGTGGGG
TTGCTAATAAGCACATTCCATTGAATGAGAGATTTGTTCAGCATATGGATCGCTGTCTTACTTGTCGTGCCTGCGAGAGT
GTGTGTCCAAGTAACGTCGCCTATGGCCGCTTGATTAATAATGCGCGTGCCATGATTCATGAAAACTCATCCTTTGTTCA
AAAAGAAAATCGAAGTGGAAAGAGTTGGTTGAGGGATTTGCTGGAACGAGAGCTGGTTGCGAAATCTGCTCGATTTGACA
TATTGCGGCCAGCGTTGCGTCTATTGGTCAGGAGTGGTTTGCTGTCGTTGTTGTTACGGTTGAATGTACTGAAAAGAAAT
GCCCTGGCTCAGTCTCTGCTATTTCTGGCAACACGCAATCTACCGGGGCAAATATGGCGTGGCTCATACCCGGCTAAGGG
TTTTCTGCGCGGTGAGGTGGCGTTGTTTCTGGGTTGTGTTGCAAGGCTGGTTGATACCGAAACACTGCTTTCAACCATAT
CTATATTGAACCAGCTGGGTTATACAGTGCATGTGCCAAGTGCACAAACGTGTTGTGGAGCGCTTTATCAACATAGTGGT
CAGGTTGATGCAGCAATGTCGCTGGCTCAACAAAATCTCCGTGCTTTTGAGGGGTTGAATATTCAGGCAATTATCAGTAC
TGCTTCCGGTTGTGGTGTTCAATTGGCAGAATATTCGTCACGATTAGAAGATGCCGGGTTTTCTGTGCCGGTAATGGATA
TTGGTCAGTTTCTCGATGCACGGGTATGGGATGAAATCAGTTTTGTGCCCTTGTCGCGAAAAATAGCGGTGCATGAGCCT
TGTACGTTGCGTAATACACTGCGTGCTTCAGGCTATCTGTATTCTGTGCTGCAACATATTCCGGGAATTGAAGTAGTGGA
ACTACCTGGTAACGATCGGTGTTGCGGCGCGGCCGGTACCTATTTTCTTGATCAGCCAGAATTTGCAGGAGCTTTGCTTG
ATGAAAAATTACAAACTTTCGAACAGACCAGGGCTGATTGCCTGGTGACGGCGAATATCGGTTGTGCCTTGCATATTGCT
AACGGGTTGGTGAGAAAAGGGAAAAATATAGAGGTTTTGCATCCGGTAACGTTGCTTGCTCGGCAAATGCGTATAAAATG
A

Upstream 100 bases:

>100_bases
GCCAAATTAAGGTAATCGGTGATATTAATATAATCATTCAAGTAAAAGTGTATCGTGAACAATACAATGGTTTGATTCTA
ATAAGGTAGCTGTAAAAGTC

Downstream 100 bases:

>100_bases
AAAGTAGATTGTTCTGGCTCAAGACGGGAAAAAGAGATTAGTGGAGGAATTTTATGTTGAATGTTGATAAATTGATTATT
GGTTTTGATAACGCTCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKNSDHSYYLIKELLAEANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIPLNERFVQHMDRCLTCRACES
VCPSNVAYGRLINNARAMIHENSSFVQKENRSGKSWLRDLLERELVAKSARFDILRPALRLLVRSGLLSLLLRLNVLKRN
ALAQSLLFLATRNLPGQIWRGSYPAKGFLRGEVALFLGCVARLVDTETLLSTISILNQLGYTVHVPSAQTCCGALYQHSG
QVDAAMSLAQQNLRAFEGLNIQAIISTASGCGVQLAEYSSRLEDAGFSVPVMDIGQFLDARVWDEISFVPLSRKIAVHEP
CTLRNTLRASGYLYSVLQHIPGIEVVELPGNDRCCGAAGTYFLDQPEFAGALLDEKLQTFEQTRADCLVTANIGCALHIA
NGLVRKGKNIEVLHPVTLLARQMRIK

Sequences:

>Translated_426_residues
MKNSDHSYYLIKELLAEANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIPLNERFVQHMDRCLTCRACES
VCPSNVAYGRLINNARAMIHENSSFVQKENRSGKSWLRDLLERELVAKSARFDILRPALRLLVRSGLLSLLLRLNVLKRN
ALAQSLLFLATRNLPGQIWRGSYPAKGFLRGEVALFLGCVARLVDTETLLSTISILNQLGYTVHVPSAQTCCGALYQHSG
QVDAAMSLAQQNLRAFEGLNIQAIISTASGCGVQLAEYSSRLEDAGFSVPVMDIGQFLDARVWDEISFVPLSRKIAVHEP
CTLRNTLRASGYLYSVLQHIPGIEVVELPGNDRCCGAAGTYFLDQPEFAGALLDEKLQTFEQTRADCLVTANIGCALHIA
NGLVRKGKNIEVLHPVTLLARQMRIK
>Mature_426_residues
MKNSDHSYYLIKELLAEANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIPLNERFVQHMDRCLTCRACES
VCPSNVAYGRLINNARAMIHENSSFVQKENRSGKSWLRDLLERELVAKSARFDILRPALRLLVRSGLLSLLLRLNVLKRN
ALAQSLLFLATRNLPGQIWRGSYPAKGFLRGEVALFLGCVARLVDTETLLSTISILNQLGYTVHVPSAQTCCGALYQHSG
QVDAAMSLAQQNLRAFEGLNIQAIISTASGCGVQLAEYSSRLEDAGFSVPVMDIGQFLDARVWDEISFVPLSRKIAVHEP
CTLRNTLRASGYLYSVLQHIPGIEVVELPGNDRCCGAAGTYFLDQPEFAGALLDEKLQTFEQTRADCLVTANIGCALHIA
NGLVRKGKNIEVLHPVTLLARQMRIK

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=394, Percent_Identity=29.9492385786802, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1786497, Length=235, Percent_Identity=25.1063829787234, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788576, Length=438, Percent_Identity=24.8858447488584, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 47011; Mature: 47011

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSDHSYYLIKELLAEANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIP
CCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCC
LNERFVQHMDRCLTCRACESVCPSNVAYGRLINNARAMIHENSSFVQKENRSGKSWLRDL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHH
LERELVAKSARFDILRPALRLLVRSGLLSLLLRLNVLKRNALAQSLLFLATRNLPGQIWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
GSYPAKGFLRGEVALFLGCVARLVDTETLLSTISILNQLGYTVHVPSAQTCCGALYQHSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCC
QVDAAMSLAQQNLRAFEGLNIQAIISTASGCGVQLAEYSSRLEDAGFSVPVMDIGQFLDA
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHH
RVWDEISFVPLSRKIAVHEPCTLRNTLRASGYLYSVLQHIPGIEVVELPGNDRCCGAAGT
HHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
YFLDQPEFAGALLDEKLQTFEQTRADCLVTANIGCALHIANGLVRKGKNIEVLHPVTLLA
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHCCCCCEEECHHHHHH
RQMRIK
HHHCCC
>Mature Secondary Structure
MKNSDHSYYLIKELLAEANRCVACGLCLPHCPTYHLTHSEADSPRGRIALMSGVANKHIP
CCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCC
LNERFVQHMDRCLTCRACESVCPSNVAYGRLINNARAMIHENSSFVQKENRSGKSWLRDL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHH
LERELVAKSARFDILRPALRLLVRSGLLSLLLRLNVLKRNALAQSLLFLATRNLPGQIWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
GSYPAKGFLRGEVALFLGCVARLVDTETLLSTISILNQLGYTVHVPSAQTCCGALYQHSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCC
QVDAAMSLAQQNLRAFEGLNIQAIISTASGCGVQLAEYSSRLEDAGFSVPVMDIGQFLDA
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHH
RVWDEISFVPLSRKIAVHEPCTLRNTLRASGYLYSVLQHIPGIEVVELPGNDRCCGAAGT
HHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
YFLDQPEFAGALLDEKLQTFEQTRADCLVTANIGCALHIANGLVRKGKNIEVLHPVTLLA
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHCCCCCEEECHHHHHH
RQMRIK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]