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The map label for this gene is rfaL [C]

Identifier: 114330457

GI number: 114330457

Start: 451348

End: 452565

Strand: Direct

Name: rfaL [C]

Synonym: Neut_0437

Alternate gene names: 114330457

Gene position: 451348-452565 (Clockwise)

Preceding gene: 114330456

Following gene: 114330458

Centisome position: 16.96

GC content: 41.46

Gene sequence:

>1218_bases
GTGTTTTTTTGTCTTGCACTTTGGCCCAGTGGGTTGGTGTATTGGGGAATAGGTTTGCTGGTTGTTGCCTGGCTGGTGGA
TGGAGGATTATCCAGATTTCCTGATCTGTTAAAAGAGCCTTTAATACAAGGCGTTCTTGTTTTTTGTGGGGTATGGGGAG
TTGGCTTGCTCTGGAGTGATTTTTCTGTATCCCTTACAGGGAAATGGGAAAAATATTTTATTCTGCTGATAATTATCCCA
TTCTTTTCATTGTTAAATAAAGAGCGTTTACCTTGGGTGACGGGGGCGCTGATTAGTGGTTATCTGGGAGTGGTTGTGTT
GGGTGGCTATCAGTATGCAGTACTTGGTGAGCAAGGAATTTCTTTGTTTGGTATGTCTTATTTGAATTTCTCATCCGCAC
TAGGAATCGGCGTTATTTTGGCTGTTTATGGTGGATGGGTTACTTTGTCCAGAATGCGCTGGTTTTTATCGGCTTTGTTA
TGGATAACCGCTTTGTTGTTGCTATTTCTTCAGTTTCGTGAGAATGCAAGAGGTATATTGCTCTCAACCGTAATGATACT
CTTGTTAATGTTTTGTCTGCGTTATCAAGTAAAAGGTAAAGTGTTAGCGAGTTACCTAGCTTCAATTATTGCAGTAACTG
TATTGTTCGCTGCGAGCAGTGATGTTTTTCATAAAAGACTGGAAGCAATCGGCTCAGATCTTCAATTATTTCAGCAAGGG
CATTACCAAACCAGCGTAGGTTATCGGCTGGCAATCTGGGATATTGGTTTGCACGGTCTTGTTGACGCTCCTGTCATAGG
GCATGGTTCTGGCATGGCGAAGCATTATCTCCAAAATAGTTTTATGTCCTATAAAGAAGGGATTTACCAGGATTTGCCTG
AGTTTCATGAAGCAAAACATTTCCATAATGAACTAATTGAAATTGGCGTACATCTGGGATTGCTTGGTATATTGGCTTTT
ATATTCTTATTATGGTGCTGGTTCAAAACATTCAAGCAACATCAGATGGCTTTATTGGGTGGTGCAATTGTGTGTTTCAC
TTTTCTGTCCGGTTTGACTGATACTTTCTTACTATACAGCAGAATTCCACCATTTTTGCTCGCAGTGACGGCCATAGCTG
TTTGCTGGCAGAGGTATGAAGGAAGCCTTGATCTAATCGATCGAAAGAGTCCGCAAATCAAGGGTGGAATTCGTAAACGT
TCCAGTATGGCTCGATAA

Upstream 100 bases:

>100_bases
AAGCATTGTAAATGCTCGTCAACCGGTTGACTTGAAAGGATTTATTTTGAGTAGTGGGATTGTATTGAGTTGGCGTGAGT
TGCTGGTGCGGTTTGTATTG

Downstream 100 bases:

>100_bases
TGCCAATCCTGCAGCCACCGGTCGTTGATAATCCAGATGGATTGATCCCTGTTAATCCGATGATTGAACATTATATGTAC
ACTCTGACAGAGCAGTTTGA

Product: O-antigen polymerase

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSDFSVSLTGKWEKYFILLIIIP
FFSLLNKERLPWVTGALISGYLGVVVLGGYQYAVLGEQGISLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALL
WITALLLLFLQFRENARGILLSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQG
HYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKHFHNELIEIGVHLGLLGILAF
IFLLWCWFKTFKQHQMALLGGAIVCFTFLSGLTDTFLLYSRIPPFLLAVTAIAVCWQRYEGSLDLIDRKSPQIKGGIRKR
SSMAR

Sequences:

>Translated_405_residues
MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSDFSVSLTGKWEKYFILLIIIP
FFSLLNKERLPWVTGALISGYLGVVVLGGYQYAVLGEQGISLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALL
WITALLLLFLQFRENARGILLSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQG
HYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKHFHNELIEIGVHLGLLGILAF
IFLLWCWFKTFKQHQMALLGGAIVCFTFLSGLTDTFLLYSRIPPFLLAVTAIAVCWQRYEGSLDLIDRKSPQIKGGIRKR
SSMAR
>Mature_405_residues
MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSDFSVSLTGKWEKYFILLIIIP
FFSLLNKERLPWVTGALISGYLGVVVLGGYQYAVLGEQGISLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALL
WITALLLLFLQFRENARGILLSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQG
HYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKHFHNELIEIGVHLGLLGILAF
IFLLWCWFKTFKQHQMALLGGAIVCFTFLSGLTDTFLLYSRIPPFLLAVTAIAVCWQRYEGSLDLIDRKSPQIKGGIRKR
SSMAR

Specific function: Adds The O-Antigen On The Glucose Group Of Lps. [C]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45346; Mature: 45346

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSD
CEEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSVSLTGKWEKYFILLIIIPFFSLLNKERLPWVTGALISGYLGVVVLGGYQYAVLGEQGI
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALLWITALLLLFLQFRENARGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCC
HYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKH
CCEECCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FHNELIEIGVHLGLLGILAFIFLLWCWFKTFKQHQMALLGGAIVCFTFLSGLTDTFLLYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPPFLLAVTAIAVCWQRYEGSLDLIDRKSPQIKGGIRKRSSMAR
HCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSD
CEEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSVSLTGKWEKYFILLIIIPFFSLLNKERLPWVTGALISGYLGVVVLGGYQYAVLGEQGI
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALLWITALLLLFLQFRENARGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCC
HYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKH
CCEECCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FHNELIEIGVHLGLLGILAFIFLLWCWFKTFKQHQMALLGGAIVCFTFLSGLTDTFLLYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPPFLLAVTAIAVCWQRYEGSLDLIDRKSPQIKGGIRKRSSMAR
HCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA