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The map label for this gene is 114330332

Identifier: 114330332

GI number: 114330332

Start: 312940

End: 313575

Strand: Reverse

Name: 114330332

Synonym: Neut_0305

Alternate gene names: NA

Gene position: 313575-312940 (Counterclockwise)

Preceding gene: 114330340

Following gene: 114330331

Centisome position: 11.78

GC content: 48.11

Gene sequence:

>636_bases
ATGAAACTCATTGGAACTACTGTAGCAGCAATCGCACTCACATTTTCCAGCTTTGTATTTGCCGAATCCCCAGCTGCGGG
CGATGTTGAGAAAGGCAAAGAAATTGCAGCCGGAATATGTGCAGGCTGTCACAATGCTGATGGTAACAGTACTATTCCTA
TTTACCCCATTCTTGCGGGGCAGGAACCGGGATATACTGCCAAGCAATTGCATGATTTCAAGGCCGCAGCAGGTGAAACT
GCCGCGCGTGACAATATGATTATGGCTCCCATGGTGGCAACATTAAGCGAGAGCGACATCGAAAATCTTGCTGCTTACTA
TTCACAGCAAAAGCCACAACCCGGAATAGTTGGTGATGCTTCCCTGATAGAGGAAGGAAAAAGGCTTTATCAGGGCGGAA
ATCTGGAAAACTTTATTCCTGCGTGCTCCAGCTGCCATTCTCCCAATGGACAAGGTATTCCACCGCATTATCCAAGAATA
GATGGCCAGCATGCCGCCTACACTCTGTCCCAGCTACAAGCATTTCGCCTGGGAACACGCAAGAATGACACGAACAGTGC
CATGCAGATGATTGTTTCGCGCATGAGTGAACAAGAGATGAAGGCAGTATCTGAGTACATCACCACACTCAGGTAA

Upstream 100 bases:

>100_bases
TAAGTAAACAATAGCAGCGTTTACTGTAGTCAACAAATCTTGTTAGAATACATATATATTGTCTCTTTTATCAGAAACTA
CTTTATAGCCTATAACGATC

Downstream 100 bases:

>100_bases
CATCTTACTTATCTGACGTAATTGACAGGAGACATTCTTCAAGAATTAACCTCCTGTTTTTTATATTATTACGATCATTC
AACCGGCCTCAGTAAGGTTT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKLIGTTVAAIALTFSSFVFAESPAAGDVEKGKEIAAGICAGCHNADGNSTIPIYPILAGQEPGYTAKQLHDFKAAAGET
AARDNMIMAPMVATLSESDIENLAAYYSQQKPQPGIVGDASLIEEGKRLYQGGNLENFIPACSSCHSPNGQGIPPHYPRI
DGQHAAYTLSQLQAFRLGTRKNDTNSAMQMIVSRMSEQEMKAVSEYITTLR

Sequences:

>Translated_211_residues
MKLIGTTVAAIALTFSSFVFAESPAAGDVEKGKEIAAGICAGCHNADGNSTIPIYPILAGQEPGYTAKQLHDFKAAAGET
AARDNMIMAPMVATLSESDIENLAAYYSQQKPQPGIVGDASLIEEGKRLYQGGNLENFIPACSSCHSPNGQGIPPHYPRI
DGQHAAYTLSQLQAFRLGTRKNDTNSAMQMIVSRMSEQEMKAVSEYITTLR
>Mature_211_residues
MKLIGTTVAAIALTFSSFVFAESPAAGDVEKGKEIAAGICAGCHNADGNSTIPIYPILAGQEPGYTAKQLHDFKAAAGET
AARDNMIMAPMVATLSESDIENLAAYYSQQKPQPGIVGDASLIEEGKRLYQGGNLENFIPACSSCHSPNGQGIPPHYPRI
DGQHAAYTLSQLQAFRLGTRKNDTNSAMQMIVSRMSEQEMKAVSEYITTLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22530; Mature: 22530

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIGTTVAAIALTFSSFVFAESPAAGDVEKGKEIAAGICAGCHNADGNSTIPIYPILAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
QEPGYTAKQLHDFKAAAGETAARDNMIMAPMVATLSESDIENLAAYYSQQKPQPGIVGDA
CCCCCHHHHHHHHHHHCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SLIEEGKRLYQGGNLENFIPACSSCHSPNGQGIPPHYPRIDGQHAAYTLSQLQAFRLGTR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KNDTNSAMQMIVSRMSEQEMKAVSEYITTLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLIGTTVAAIALTFSSFVFAESPAAGDVEKGKEIAAGICAGCHNADGNSTIPIYPILAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
QEPGYTAKQLHDFKAAAGETAARDNMIMAPMVATLSESDIENLAAYYSQQKPQPGIVGDA
CCCCCHHHHHHHHHHHCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SLIEEGKRLYQGGNLENFIPACSSCHSPNGQGIPPHYPRIDGQHAAYTLSQLQAFRLGTR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KNDTNSAMQMIVSRMSEQEMKAVSEYITTLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA