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The map label for this gene is ybcL [C]

Identifier: 114330288

GI number: 114330288

Start: 273918

End: 274400

Strand: Direct

Name: ybcL [C]

Synonym: Neut_0261

Alternate gene names: 114330288

Gene position: 273918-274400 (Clockwise)

Preceding gene: 114330287

Following gene: 114330289

Centisome position: 10.29

GC content: 47.2

Gene sequence:

>483_bases
ATGGCACTCAGTTTGACATCTCCATCGTTTTCTCATCAAGGCCTAATTCCAGCAGATCATACCTGCGACGGTGAGGACTC
TTCTCCGAAGCTCATCTGGACAGGAGTACCAGAAAATACGAAAAGCCTGGTTCTGATCGTTGATGACCCGGATGCACCTG
ATCCACAGGCACCCAAAATGACATGGGTACATTGGGTACTTTACAATATTCCAATTACGGTTGATAACCTGCCAGCACAA
GTAACCGTAGATAGATTGCCTGCCGGTACTTTGGAAGGTATAAACGACTGGGGAAGAACTGGTTACGGCGGACCATGTCC
ACCAATCGGAACCCATCGCTATTTTCATAAGTTGTACGCTCTGGATACTATATTGCCCGATTTGAACCAACCAACCAAAG
CTGTTCTGGAAAAAGCCATGCAAGGTCACATTATTGCTCAGGCTGAATTAATCGGACGATATTGCCGCCCAAGCAACGCC
TGA

Upstream 100 bases:

>100_bases
GAGCTGCATGCCTGAATACCCGGATACCCAGATACCACGAAAAAAGTGGCGCAAGCTATGCATAAGCATACTCCCAACCA
TTTTCTTACAATAAAAAATC

Downstream 100 bases:

>100_bases
AACACAAACAGCCAAGTTAAAAGCCAACAAACTGCATCATCCTGTCAATCCTGGCTGCTGACTCCGATACTGCTATCACT
CTTGTTAATATGTCTATCAA

Product: YbhB and YbcL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MALSLTSPSFSHQGLIPADHTCDGEDSSPKLIWTGVPENTKSLVLIVDDPDAPDPQAPKMTWVHWVLYNIPITVDNLPAQ
VTVDRLPAGTLEGINDWGRTGYGGPCPPIGTHRYFHKLYALDTILPDLNQPTKAVLEKAMQGHIIAQAELIGRYCRPSNA

Sequences:

>Translated_160_residues
MALSLTSPSFSHQGLIPADHTCDGEDSSPKLIWTGVPENTKSLVLIVDDPDAPDPQAPKMTWVHWVLYNIPITVDNLPAQ
VTVDRLPAGTLEGINDWGRTGYGGPCPPIGTHRYFHKLYALDTILPDLNQPTKAVLEKAMQGHIIAQAELIGRYCRPSNA
>Mature_159_residues
ALSLTSPSFSHQGLIPADHTCDGEDSSPKLIWTGVPENTKSLVLIVDDPDAPDPQAPKMTWVHWVLYNIPITVDNLPAQV
TVDRLPAGTLEGINDWGRTGYGGPCPPIGTHRYFHKLYALDTILPDLNQPTKAVLEKAMQGHIIAQAELIGRYCRPSNA

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=135, Percent_Identity=40.7407407407407, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786990, Length=137, Percent_Identity=35.7664233576642, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17475; Mature: 17344

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSLTSPSFSHQGLIPADHTCDGEDSSPKLIWTGVPENTKSLVLIVDDPDAPDPQAPKM
CEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCC
TWVHWVLYNIPITVDNLPAQVTVDRLPAGTLEGINDWGRTGYGGPCPPIGTHRYFHKLYA
EEEEEEEEECCEEECCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHH
LDTILPDLNQPTKAVLEKAMQGHIIAQAELIGRYCRPSNA
HHHHCCCCCCCHHHHHHHHHHCCEEEHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALSLTSPSFSHQGLIPADHTCDGEDSSPKLIWTGVPENTKSLVLIVDDPDAPDPQAPKM
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCC
TWVHWVLYNIPITVDNLPAQVTVDRLPAGTLEGINDWGRTGYGGPCPPIGTHRYFHKLYA
EEEEEEEEECCEEECCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHH
LDTILPDLNQPTKAVLEKAMQGHIIAQAELIGRYCRPSNA
HHHHCCCCCCCHHHHHHHHHHCCEEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]