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The map label for this gene is yajR [C]

Identifier: 114330243

GI number: 114330243

Start: 219416

End: 220588

Strand: Reverse

Name: yajR [C]

Synonym: Neut_0214

Alternate gene names: 114330243

Gene position: 220588-219416 (Counterclockwise)

Preceding gene: 114330244

Following gene: 114330242

Centisome position: 8.29

GC content: 52.6

Gene sequence:

>1173_bases
ATGACAAAAAAAACAATTCTCAGCAAGATTCCTTCCGGCGTCTGGGTACTGGGCTTCGTTAGCATGCTGATGGACATCTC
CTCCGAGATGATTCACAGTCTGCTGCCGTTATTCCTGGCCGGCACTCTGGGTGCAAGTGCTCTTATGGTTGGCTTGATCG
AAGGGCTGGCCGAATCCACGGCACTCATTGTCAAGGTATTCTCGGGCGCACTCAGCGACTATCTAGGCAAACGCAAAGCA
CTGGCTCTGTTCGGTTACGCCCTAGGAGCACTGACCAAACCGTTGTTTGCCATTGCCCCAGTCACCAGTGTTGTACTCGC
GGCTCGATTGTTGGATCGGGTGGGTAAAGGTGTCCGGGGTGCTCCACGTGACGCGCTGGTAGCGGATATCACCCCCATAG
AGGTGCGCGGTGCGGCATTTGGCCTCAGACAATCGCTGGATACAGTCGGTGCATTCCTTGGCCCGTTATTGGCAACCGGC
CTGATGCTACTGTGGGCAAACGACTTCCGGGCAGTGTTTTGGGTTGCTGTTATCCCTGGGTTGTTAGCGGTCGCGTTGCT
ATTCTTCGGTGTTCATGAGCCAAAGCAAAACGTTAGTAACAAACGTATCAATCCAATCTGCAAAGAGAATCTGATGCGTT
TGCATGCCACGTACTGGTGGGTTGTCGGTATCGGTGCCGTATTCACACTGGCACGGTTCAGTGAAGCATTTCTGGTGCTT
CGCGCTCAACAAGGTGGCATCCCACTTGCACTGGTTCCACTGGTAATGGTTGCCATGAACTTGGTTTATGCAGCATCGGC
CTACCCTTTTGGCAAGTTATCCGATCGCATAAGTCACAAGATATTGCTGGCACTAGGGCTGTTTGTTCTGATTGTCGCTG
ATCTGGTATTGGCTATCGATGCTCATTGGATGACAGTACTCGTAGGTGTCGCGTTATGGGGAATTCACATGGGCATGACG
CAGGGGCTGTTGGCAACAATGGTTGCTAATGCCGCACCGGTTGATTTACGCGGTACAGCGTATGGATTCTTTAACCTTAT
CAGCGGCATTGCCATGCTCATCGCCAGTGTGGTCGCCGGTCTGCTTTGGGATCAGATGGGAGCGTCCTTCACGTTCTATG
CCAGCGCCGGGTTCTGCGGTATTACATTAATTGCACTGGTCAAGCGAGGATAA

Upstream 100 bases:

>100_bases
ATCGCGGCAGGCATCTTCGCCCTGCTTGGTCTTGCAACGCTGCTGAGGGGGGCGGAGCAGCTTGGATTCTAAGGTAAGAC
TGTAAAAGCAAAGTGTCATC

Downstream 100 bases:

>100_bases
CTGTGGATAGTAAAGTGATCAATACAAACGTATCCTGGTACAAAAAGTTTCGGCTGTAGCAGATACTCCGGAAAGCTATA
ATCAATTCTGTCATCCGGAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTKKTILSKIPSGVWVLGFVSMLMDISSEMIHSLLPLFLAGTLGASALMVGLIEGLAESTALIVKVFSGALSDYLGKRKA
LALFGYALGALTKPLFAIAPVTSVVLAARLLDRVGKGVRGAPRDALVADITPIEVRGAAFGLRQSLDTVGAFLGPLLATG
LMLLWANDFRAVFWVAVIPGLLAVALLFFGVHEPKQNVSNKRINPICKENLMRLHATYWWVVGIGAVFTLARFSEAFLVL
RAQQGGIPLALVPLVMVAMNLVYAASAYPFGKLSDRISHKILLALGLFVLIVADLVLAIDAHWMTVLVGVALWGIHMGMT
QGLLATMVANAAPVDLRGTAYGFFNLISGIAMLIASVVAGLLWDQMGASFTFYASAGFCGITLIALVKRG

Sequences:

>Translated_390_residues
MTKKTILSKIPSGVWVLGFVSMLMDISSEMIHSLLPLFLAGTLGASALMVGLIEGLAESTALIVKVFSGALSDYLGKRKA
LALFGYALGALTKPLFAIAPVTSVVLAARLLDRVGKGVRGAPRDALVADITPIEVRGAAFGLRQSLDTVGAFLGPLLATG
LMLLWANDFRAVFWVAVIPGLLAVALLFFGVHEPKQNVSNKRINPICKENLMRLHATYWWVVGIGAVFTLARFSEAFLVL
RAQQGGIPLALVPLVMVAMNLVYAASAYPFGKLSDRISHKILLALGLFVLIVADLVLAIDAHWMTVLVGVALWGIHMGMT
QGLLATMVANAAPVDLRGTAYGFFNLISGIAMLIASVVAGLLWDQMGASFTFYASAGFCGITLIALVKRG
>Mature_389_residues
TKKTILSKIPSGVWVLGFVSMLMDISSEMIHSLLPLFLAGTLGASALMVGLIEGLAESTALIVKVFSGALSDYLGKRKAL
ALFGYALGALTKPLFAIAPVTSVVLAARLLDRVGKGVRGAPRDALVADITPIEVRGAAFGLRQSLDTVGAFLGPLLATGL
MLLWANDFRAVFWVAVIPGLLAVALLFFGVHEPKQNVSNKRINPICKENLMRLHATYWWVVGIGAVFTLARFSEAFLVLR
AQQGGIPLALVPLVMVAMNLVYAASAYPFGKLSDRISHKILLALGLFVLIVADLVLAIDAHWMTVLVGVALWGIHMGMTQ
GLLATMVANAAPVDLRGTAYGFFNLISGIAMLIASVVAGLLWDQMGASFTFYASAGFCGITLIALVKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41395; Mature: 41264

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKTILSKIPSGVWVLGFVSMLMDISSEMIHSLLPLFLAGTLGASALMVGLIEGLAEST
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIVKVFSGALSDYLGKRKALALFGYALGALTKPLFAIAPVTSVVLAARLLDRVGKGVRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APRDALVADITPIEVRGAAFGLRQSLDTVGAFLGPLLATGLMLLWANDFRAVFWVAVIPG
CCCCCHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVALLFFGVHEPKQNVSNKRINPICKENLMRLHATYWWVVGIGAVFTLARFSEAFLVL
HHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
RAQQGGIPLALVPLVMVAMNLVYAASAYPFGKLSDRISHKILLALGLFVLIVADLVLAID
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHWMTVLVGVALWGIHMGMTQGLLATMVANAAPVDLRGTAYGFFNLISGIAMLIASVVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLWDQMGASFTFYASAGFCGITLIALVKRG
HHHHHHCCCEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]