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The map label for this gene is vapI [H]

Identifier: 114330181

GI number: 114330181

Start: 152611

End: 152916

Strand: Reverse

Name: vapI [H]

Synonym: Neut_0150

Alternate gene names: 114330181

Gene position: 152916-152611 (Counterclockwise)

Preceding gene: 114330182

Following gene: 114330174

Centisome position: 5.75

GC content: 54.9

Gene sequence:

>306_bases
ATGACTAGACCTGTAAACTGCATGCGTGCCGTCCATCCCGGTGAGGTACTGCGTGAAGATTTTTTGATTCCAGCTGGAAT
AAGTGTCAACGCTCTGGCGATTGCCTTGAGTGTGCCAGCCACCCGCATTCATGAAATCGTCAAGGAGCGGCGCGCCGTTA
CCGCTGATACTGCTGAACGGCTGGCGCATTATTTCGGGGGTGATGCTGCTTCCTGGCTTGCTTTGCAGGCCAGCTACGAT
CTGAAAACACTGCCCACGCGCGATGAAATTGAACGCCGCGTGCAAAGACGTGAGGAACACCGGTGA

Upstream 100 bases:

>100_bases
ATGGAGCATTCGTATCAACGCACAATGGCGTATATGCTTTACTTGGTCTGATCTTGGTCCTGCCGATGTAGAGATTGTTG
ATTATCATTGAGAAATAACC

Downstream 100 bases:

>100_bases
TTTGAACTGGTACTGGCAACGGCCAATTACCCTTGTACTGCTCGGGATAGATTTCATGTTATCCCCTGTGTTTCTATTGC
TTGCTGCAAACAGATTCTCT

Product: XRE family plasmid maintenance system antidote protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTRPVNCMRAVHPGEVLREDFLIPAGISVNALAIALSVPATRIHEIVKERRAVTADTAERLAHYFGGDAASWLALQASYD
LKTLPTRDEIERRVQRREEHR

Sequences:

>Translated_101_residues
MTRPVNCMRAVHPGEVLREDFLIPAGISVNALAIALSVPATRIHEIVKERRAVTADTAERLAHYFGGDAASWLALQASYD
LKTLPTRDEIERRVQRREEHR
>Mature_100_residues
TRPVNCMRAVHPGEVLREDFLIPAGISVNALAIALSVPATRIHEIVKERRAVTADTAERLAHYFGGDAASWLALQASYDL
KTLPTRDEIERRVQRREEHR

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11402; Mature: 11271

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPVNCMRAVHPGEVLREDFLIPAGISVNALAIALSVPATRIHEIVKERRAVTADTAER
CCCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LAHYFGGDAASWLALQASYDLKTLPTRDEIERRVQRREEHR
HHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRPVNCMRAVHPGEVLREDFLIPAGISVNALAIALSVPATRIHEIVKERRAVTADTAER
CCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LAHYFGGDAASWLALQASYDLKTLPTRDEIERRVQRREEHR
HHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169216 [H]