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The map label for this gene is fdxA [H]

Identifier: 114330158

GI number: 114330158

Start: 123841

End: 124164

Strand: Direct

Name: fdxA [H]

Synonym: Neut_0127

Alternate gene names: 114330158

Gene position: 123841-124164 (Clockwise)

Preceding gene: 114330127

Following gene: 114330159

Centisome position: 4.65

GC content: 46.6

Gene sequence:

>324_bases
ATGACTTATGTAGTGACTGAAAGTTGTATCAAATGTAAATATACCGATTGTGTTGACGTGTGCCCTGTGGATTGCTTTCG
TGAGGGCCCCAATTTTCTGGTAATCGATCCGGATGAATGTATCGATTGTACGCTGTGTGTGGCGGAATGCCCGGTGGAAG
CAATTTATGCAGAAGATGACGTTGCTGAAGATCAGCGACGGTTCATCGCACTCAATGCGGAGTTATCCAAAATCTGGGAA
CCGATTATCGAGAAGAAAGATGCACTGCCGGATGCAGATGAATGGGCGTCTGTCACAGACAAACTGGATCATCTGGAACG
CTGA

Upstream 100 bases:

>100_bases
AATAACCCGCAATTTTGCTGTGTGGTAGTGGAATTCACCCGGATTCTGATAAAATTACAGATTCGTTATAGGAAGTGCCG
TTCGAGGACAAAATACCATC

Downstream 100 bases:

>100_bases
TAAAGGTTGCAATCGCAAAGCCGTTAATCATCATCACAATCACATATAACAAAACGGTCAAGGAGACGTGAATGATGAAA
ACTTCGATTATATGGATTTT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDDVAEDQRRFIALNAELSKIWE
PIIEKKDALPDADEWASVTDKLDHLER

Sequences:

>Translated_107_residues
MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDDVAEDQRRFIALNAELSKIWE
PIIEKKDALPDADEWASVTDKLDHLER
>Mature_106_residues
TYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDDVAEDQRRFIALNAELSKIWEP
IIEKKDALPDADEWASVTDKLDHLER

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12164; Mature: 12033

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD
CCEEECCHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCHHEEECCCC
VAEDQRRFIALNAELSKIWEPIIEKKDALPDADEWASVTDKLDHLER
CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD
CEEECCHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCHHEEECCCC
VAEDQRRFIALNAELSKIWEPIIEKKDALPDADEWASVTDKLDHLER
CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]