| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114330131
Identifier: 114330131
GI number: 114330131
Start: 96994
End: 97584
Strand: Reverse
Name: 114330131
Synonym: Neut_0100
Alternate gene names: NA
Gene position: 97584-96994 (Counterclockwise)
Preceding gene: 114330132
Following gene: 114330130
Centisome position: 3.67
GC content: 63.62
Gene sequence:
>591_bases ATGGCAGCGACAACCCTAAGCCCGGTGCAGCCCCTGTGGGTGCTGCTGTTGGCGGCTGGTCTGCTCACCAGTCACGGGTA TGCTCAGGAAGTCCCCCCTCCCGCCTATCAGTTGGCAGCTCAGCGAGTAGGCATCCCATCGACGGTGCTCTTTGCCGTGG CCCTGCAAGAAAGCGGCATCCGCCGCGACAACCGCATCATCCCTTGGCCTTGGTCGCTGAATGTAGCGGGTCAGTCGTAC CGTTATGCCACGCGCGCCGAGGCTTGCACCGCTCTGCTCCAGACGCTGAGGGAGGCTGCGCCCACCCGCGTTGATGTGGG CCTCGCGCAAATCAACCTGGGCTATCAGAAACACCGCTACAACCGCCCGTGTGACCTGCTCGACCCCTACGCCAACTTGG CAATTGCCGCCGCCATTCTGCTTGAGCAGTACAAGCCGGGTGAGGATTGGCTGTTGGCAATGGGTCGTTACCACCGTCCA GCAGGCGGAGAGCCGGCGGCGCGTTATCGGCGCAGCGTTTCCCGGCACCTGAACCGTGTGCAGGGTTCGCCCGGCGCGTC ACGCGCCAGCTATCTGGAGAGTTCACAATGA
Upstream 100 bases:
>100_bases TACGCAGCGGCACTATCACTCTAAATCACGACGGGGGGCGTTGGCTGTCGCTCGGTCTGTCTGGCGACCTGCCTGCCGTT GTGCTTCAGGTGAATGGGCA
Downstream 100 bases:
>100_bases AATCCATTGCTCTGGCCGTGCTCGGCCTGTGCGTCCTGATCACCGCCACACCTTTGTCAGCCCTACAAGCAGCCGAACCG TTGATTGTGGTGGAAGATCG
Product: lytic transglycosylase, catalytic
Products: NA
Alternate protein names: Transglycosylase Slt Family; Signal Peptide; Transglycosylase SLT Domain-Containing Protein; Lytic Transglycosylase; Phage Transglycosylase; Soluble Lytic Murein Transglycosylase; Transglycosylase SLT Domain-Containing
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MAATTLSPVQPLWVLLLAAGLLTSHGYAQEVPPPAYQLAAQRVGIPSTVLFAVALQESGIRRDNRIIPWPWSLNVAGQSY RYATRAEACTALLQTLREAAPTRVDVGLAQINLGYQKHRYNRPCDLLDPYANLAIAAAILLEQYKPGEDWLLAMGRYHRP AGGEPAARYRRSVSRHLNRVQGSPGASRASYLESSQ
Sequences:
>Translated_196_residues MAATTLSPVQPLWVLLLAAGLLTSHGYAQEVPPPAYQLAAQRVGIPSTVLFAVALQESGIRRDNRIIPWPWSLNVAGQSY RYATRAEACTALLQTLREAAPTRVDVGLAQINLGYQKHRYNRPCDLLDPYANLAIAAAILLEQYKPGEDWLLAMGRYHRP AGGEPAARYRRSVSRHLNRVQGSPGASRASYLESSQ >Mature_195_residues AATTLSPVQPLWVLLLAAGLLTSHGYAQEVPPPAYQLAAQRVGIPSTVLFAVALQESGIRRDNRIIPWPWSLNVAGQSYR YATRAEACTALLQTLREAAPTRVDVGLAQINLGYQKHRYNRPCDLLDPYANLAIAAAILLEQYKPGEDWLLAMGRYHRPA GGEPAARYRRSVSRHLNRVQGSPGASRASYLESSQ
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21533; Mature: 21402
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATTLSPVQPLWVLLLAAGLLTSHGYAQEVPPPAYQLAAQRVGIPSTVLFAVALQESGI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC RRDNRIIPWPWSLNVAGQSYRYATRAEACTALLQTLREAAPTRVDVGLAQINLGYQKHRY CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCHHHHCC NRPCDLLDPYANLAIAAAILLEQYKPGEDWLLAMGRYHRPAGGEPAARYRRSVSRHLNRV CCCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QGSPGASRASYLESSQ CCCCCCHHHHHHCCCC >Mature Secondary Structure AATTLSPVQPLWVLLLAAGLLTSHGYAQEVPPPAYQLAAQRVGIPSTVLFAVALQESGI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC RRDNRIIPWPWSLNVAGQSYRYATRAEACTALLQTLREAAPTRVDVGLAQINLGYQKHRY CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCHHHHCC NRPCDLLDPYANLAIAAAILLEQYKPGEDWLLAMGRYHRPAGGEPAARYRRSVSRHLNRV CCCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QGSPGASRASYLESSQ CCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA