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The map label for this gene is ykfG [C]

Identifier: 114330110

GI number: 114330110

Start: 77979

End: 78482

Strand: Reverse

Name: ykfG [C]

Synonym: Neut_0079

Alternate gene names: 114330110

Gene position: 78482-77979 (Counterclockwise)

Preceding gene: 114330111

Following gene: 114330109

Centisome position: 2.95

GC content: 54.76

Gene sequence:

>504_bases
ATGTTCCCCACCCCTAACGTCGCCGATTCCGGCGCGCAATTAAGCATTGATCTTACCGACCAGCAGGATGATCGGATTAT
CCAGCAAGCCATTGCACTCTTGGAACATCGCGTGTTCAAGGCGGGTCCGACGCTTGATGGCCCAAAGGCGGTTCGCGATT
ATCTGCGTTTGAAGTTGATGGCCGAGCCCAACGAGGTCTTTGTCGCGGTATTTCTCAACAGTCAGCACCAGGTGCTGGCA
TGTGAATGTCTGTTCAAAGGCACGGTCAGCGAGGCGTCGGTCTACCCGCGCGTGGTGGTGCAGCGTGCGTTGGAACTTAA
TGCGTCCGCTCTAATTTTTTCCCACCAGCACCCATCGGGCGTAGCCGAGCCCAGTATGGCAGATCGCGCGATCACTAACC
GACTGAAATTCATCTTGTCGATGATCGATATCCGGGTCGTGGATCATTTCATCATTGGTAAAGGTGAACCGTACTCCTTT
GCCGAGTCCGGCTTGCTGTCGTAG

Upstream 100 bases:

>100_bases
GGTGGTGGATGCTGATTGTTCACTCATTATTCTTTATCGTCCCCGGAGGGTTTGCCCTCTCGGGTACACGTCCTCCGATC
TTATCTATTGGAGGTTTGTT

Downstream 100 bases:

>100_bases
TTCCCCCAGCCGCGCCTATGCCAGCGTGGCACTTTTCTCGTTTCAGTGTTCAACCCCCGTGCGGGCTTTCCCGGCCCGCA
CGGGTCGGCATAGAGCTCGC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MFPTPNVADSGAQLSIDLTDQQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLA
CECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGEPYSF
AESGLLS

Sequences:

>Translated_167_residues
MFPTPNVADSGAQLSIDLTDQQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLA
CECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGEPYSF
AESGLLS
>Mature_167_residues
MFPTPNVADSGAQLSIDLTDQQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLA
CECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGEPYSF
AESGLLS

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=145, Percent_Identity=46.2068965517241, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1788997, Length=142, Percent_Identity=45.7746478873239, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1788312, Length=141, Percent_Identity=43.2624113475177, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI87082300, Length=130, Percent_Identity=44.6153846153846, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18405; Mature: 18405

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPTPNVADSGAQLSIDLTDQQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLM
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHE
AEPNEVFVAVFLNSQHQVLACECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSG
ECCCEEEEEEEECCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
VAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGEPYSFAESGLLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
>Mature Secondary Structure
MFPTPNVADSGAQLSIDLTDQQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLM
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHE
AEPNEVFVAVFLNSQHQVLACECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSG
ECCCEEEEEEEECCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
VAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGEPYSFAESGLLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA