| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
Click here to switch to the map view.
The map label for this gene is 114330100
Identifier: 114330100
GI number: 114330100
Start: 69328
End: 71193
Strand: Reverse
Name: 114330100
Synonym: Neut_0069
Alternate gene names: NA
Gene position: 71193-69328 (Counterclockwise)
Preceding gene: 114330104
Following gene: 114330097
Centisome position: 2.68
GC content: 60.34
Gene sequence:
>1866_bases ATGCTCTCGCTGTTTCAGCGCAAACGGTTACTGCCAACTACCGATATGGCGCCGATGCCTTCGACCGCACCACCGAAAGG GCCGATGCGGCCAGAATCGGCCGCTTCGTTGTTGGCGACCCCGCGACGCCAACGTCTGCTGGAACACATTTGGCAACGCA CGTCACTCTCGCGTAAGCAGTTCGCATCGCTGTACCGCGCACCGTTGGAACGCTATGCCGAGCTGGTGCAGCTCTTTCCC GCCTCGGAAAGCCATCACCACGCCTATCCAGGCGGTATGCTTGATCATGGGCTGGAGATCGTCGCCTATGCCCTGAAGCT GAGGCAGTCTCATCTGCTGCCTGCGGGCACAACCCCCGAAGACCAGGCCGCTCAGGCAGAAGCCTGGACAGCCGCCACGG CCTATGCCGCGCTGTTGCATGACATCGGCAAGATTGCGGTGGATCTGCATGTGGAGCATGAAGACGGCAGCCCCTGGCAT CCCTGGCACGGCCCGCTGACTCGACCATACCGCTTTCGCTACCGGGAAGATCGTGAGTATCGGTTGCATAGCGCGGCCAC CGGACTGCTCTACACGCGGGTGCTCGATGGCGACATCCTGGACTGGCTCAACGGTTTTCCGTCGCTCTGGTCTGCGTTGC TCTATGTGCTGGCCGGACAGTATGAACACGCCGGGGTGCTGGGCGAACTGGTCATTCAGGCGGATCGCGCCTCGGTGGCC CAGGCATTGGGTGGCGATCCCGCGCGTGCCATGGCCGCGCCCAAGCATGCACTGCAGCGCAAACTGCTGGAAGGCCTTCG CTACCTGCTAAAGGAAGAGCTGAAGCTGAACCAGCCCCAGGCCTCCGATGGCTGGTTAACCCAGGATGCACTTTGGCTGG TCAGTAAAACCGTCTCGGATAAACTGCGTGCGCACCTGCTCTCGCAGGGGATCGACGGTATCCCGGCGAACAACACCGCC GTCTTTAATGTGCTGCAGGACCACGGCATGCTGCAGCCGACCCCCGAAGGCAAGGCCATCTGGAAAGCGACGGTCACCAG CGAAAGCGGCTGGTCGAACACGTTTACTTTCTTGCGCTTGTCGCCCGCGCTCATATGGGAGTCTGGTGAACGGCCCGACC CTTTCTCGGGCACCGTAATGATTGATATAACGCTCACCAGCGAGGCGGCAGACCGTAGTGTGGAGGAATCGCTGCCCGTG GCGAGCCCACTGTCATCGTATCGGGAAGCCTCACCCTCAGCCAGCAACACCACAGCCTCATCGACCTCGACAGTGTTTCC GGTGCCGCTCCAGGATACGCCCAGTACGTCTGATGTGATGGATGATCTGCTGAGGATGATTGCCACGGAACCACCTTCCG AAGCGGCCGACGATGAGGGCGCTTTGTCCATTACGATGCCTGAGCAACCAGCGCCAGAGTCGCCTATCCCGCCCACGGAG CTGACGCTCGCGCCCGCCGTCAGCTCGTCGGCTCCGATGGCACAACCGTCTGGTGAGCACTTCATGATGTGGCTTAAGCA CGGGGTCACCTCACATAAGCTCATCATCAATGATGCGAAGGCGTTGGTGCATACGGTGAGCGATACCGCTTACCTGGTCA GCCCAGGCGTGTTCCAACGCTATGCCCAGGAACACCCCCAGGTCGCTGTGCTGGCCAAGCAGGAGAAGCAGCAGGATTGG CAATGGGTGCAAAAGCGCTTTGAGAAGCTACAGCAGCACCGGAAACAACCCAATGGGCTGAACATCTGGACGTGCGAGGT CACCGGACCGCGTAAGTCGCGGCGGCTGCATGGCTACCTGCTACAAATTCCCAAGCACTTGTTTGACGAGTTACCGACGA ATAATCCCTATCTCAATCTCGAATGA
Upstream 100 bases:
>100_bases TAAAGGGCCAGAAAGAGGCAAGGGAATGGAGCCAAGGGGAAAGGCCCTACCTAAAAAGGCCAAAAGGCGCTCTTGCCAGC CTATCACCAGAGGTTTTGCG
Downstream 100 bases:
>100_bases TTTAATTTGGGCCGCAACGAACTAGCCAGCAATCGCAGCGGGCTAGCTACAATTGCTGTCTATCGGCTGTGTTCTCGAGG TCATCCAAAATCGGACAATC
Product: relaxase
Products: NA
Alternate protein names: Helicase; Relaxase-Related Protein; Metal Dependent Phosphohydrolase; Conjugal Transfer Protein Tral; Plasmid Conjugative Relaxase; Truncated TraI; HD-Superfamily Hydrolase; Nickase; Type IV Conjugative Transfer System Protein TraI; Type IV Secretion-Like Conjugative Relaxase TraI
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MLSLFQRKRLLPTTDMAPMPSTAPPKGPMRPESAASLLATPRRQRLLEHIWQRTSLSRKQFASLYRAPLERYAELVQLFP ASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPAGTTPEDQAAQAEAWTAATAYAALLHDIGKIAVDLHVEHEDGSPWH PWHGPLTRPYRFRYREDREYRLHSAATGLLYTRVLDGDILDWLNGFPSLWSALLYVLAGQYEHAGVLGELVIQADRASVA QALGGDPARAMAAPKHALQRKLLEGLRYLLKEELKLNQPQASDGWLTQDALWLVSKTVSDKLRAHLLSQGIDGIPANNTA VFNVLQDHGMLQPTPEGKAIWKATVTSESGWSNTFTFLRLSPALIWESGERPDPFSGTVMIDITLTSEAADRSVEESLPV ASPLSSYREASPSASNTTASSTSTVFPVPLQDTPSTSDVMDDLLRMIATEPPSEAADDEGALSITMPEQPAPESPIPPTE LTLAPAVSSSAPMAQPSGEHFMMWLKHGVTSHKLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVAVLAKQEKQQDW QWVQKRFEKLQQHRKQPNGLNIWTCEVTGPRKSRRLHGYLLQIPKHLFDELPTNNPYLNLE
Sequences:
>Translated_621_residues MLSLFQRKRLLPTTDMAPMPSTAPPKGPMRPESAASLLATPRRQRLLEHIWQRTSLSRKQFASLYRAPLERYAELVQLFP ASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPAGTTPEDQAAQAEAWTAATAYAALLHDIGKIAVDLHVEHEDGSPWH PWHGPLTRPYRFRYREDREYRLHSAATGLLYTRVLDGDILDWLNGFPSLWSALLYVLAGQYEHAGVLGELVIQADRASVA QALGGDPARAMAAPKHALQRKLLEGLRYLLKEELKLNQPQASDGWLTQDALWLVSKTVSDKLRAHLLSQGIDGIPANNTA VFNVLQDHGMLQPTPEGKAIWKATVTSESGWSNTFTFLRLSPALIWESGERPDPFSGTVMIDITLTSEAADRSVEESLPV ASPLSSYREASPSASNTTASSTSTVFPVPLQDTPSTSDVMDDLLRMIATEPPSEAADDEGALSITMPEQPAPESPIPPTE LTLAPAVSSSAPMAQPSGEHFMMWLKHGVTSHKLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVAVLAKQEKQQDW QWVQKRFEKLQQHRKQPNGLNIWTCEVTGPRKSRRLHGYLLQIPKHLFDELPTNNPYLNLE >Mature_621_residues MLSLFQRKRLLPTTDMAPMPSTAPPKGPMRPESAASLLATPRRQRLLEHIWQRTSLSRKQFASLYRAPLERYAELVQLFP ASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPAGTTPEDQAAQAEAWTAATAYAALLHDIGKIAVDLHVEHEDGSPWH PWHGPLTRPYRFRYREDREYRLHSAATGLLYTRVLDGDILDWLNGFPSLWSALLYVLAGQYEHAGVLGELVIQADRASVA QALGGDPARAMAAPKHALQRKLLEGLRYLLKEELKLNQPQASDGWLTQDALWLVSKTVSDKLRAHLLSQGIDGIPANNTA VFNVLQDHGMLQPTPEGKAIWKATVTSESGWSNTFTFLRLSPALIWESGERPDPFSGTVMIDITLTSEAADRSVEESLPV ASPLSSYREASPSASNTTASSTSTVFPVPLQDTPSTSDVMDDLLRMIATEPPSEAADDEGALSITMPEQPAPESPIPPTE LTLAPAVSSSAPMAQPSGEHFMMWLKHGVTSHKLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVAVLAKQEKQQDW QWVQKRFEKLQQHRKQPNGLNIWTCEVTGPRKSRRLHGYLLQIPKHLFDELPTNNPYLNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68924; Mature: 68924
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLFQRKRLLPTTDMAPMPSTAPPKGPMRPESAASLLATPRRQRLLEHIWQRTSLSRKQ CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHH FASLYRAPLERYAELVQLFPASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPAGTTPE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DQAAQAEAWTAATAYAALLHDIGKIAVDLHVEHEDGSPWHPWHGPLTRPYRFRYREDREY HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHH RLHSAATGLLYTRVLDGDILDWLNGFPSLWSALLYVLAGQYEHAGVLGELVIQADRASVA HHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QALGGDPARAMAAPKHALQRKLLEGLRYLLKEELKLNQPQASDGWLTQDALWLVSKTVSD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KLRAHLLSQGIDGIPANNTAVFNVLQDHGMLQPTPEGKAIWKATVTSESGWSNTFTFLRL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE SPALIWESGERPDPFSGTVMIDITLTSEAADRSVEESLPVASPLSSYREASPSASNTTAS CHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC STSTVFPVPLQDTPSTSDVMDDLLRMIATEPPSEAADDEGALSITMPEQPAPESPIPPTE CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LTLAPAVSSSAPMAQPSGEHFMMWLKHGVTSHKLIINDAKALVHTVSDTAYLVSPGVFQR EEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCEEEECCHHHHH YAQEHPQVAVLAKQEKQQDWQWVQKRFEKLQQHRKQPNGLNIWTCEVTGPRKSRRLHGYL HHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHH LQIPKHLFDELPTNNPYLNLE HHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MLSLFQRKRLLPTTDMAPMPSTAPPKGPMRPESAASLLATPRRQRLLEHIWQRTSLSRKQ CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHH FASLYRAPLERYAELVQLFPASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPAGTTPE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DQAAQAEAWTAATAYAALLHDIGKIAVDLHVEHEDGSPWHPWHGPLTRPYRFRYREDREY HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHH RLHSAATGLLYTRVLDGDILDWLNGFPSLWSALLYVLAGQYEHAGVLGELVIQADRASVA HHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QALGGDPARAMAAPKHALQRKLLEGLRYLLKEELKLNQPQASDGWLTQDALWLVSKTVSD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KLRAHLLSQGIDGIPANNTAVFNVLQDHGMLQPTPEGKAIWKATVTSESGWSNTFTFLRL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE SPALIWESGERPDPFSGTVMIDITLTSEAADRSVEESLPVASPLSSYREASPSASNTTAS CHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC STSTVFPVPLQDTPSTSDVMDDLLRMIATEPPSEAADDEGALSITMPEQPAPESPIPPTE CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LTLAPAVSSSAPMAQPSGEHFMMWLKHGVTSHKLIINDAKALVHTVSDTAYLVSPGVFQR EEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCEEEECCHHHHH YAQEHPQVAVLAKQEKQQDWQWVQKRFEKLQQHRKQPNGLNIWTCEVTGPRKSRRLHGYL HHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHH LQIPKHLFDELPTNNPYLNLE HHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA