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The map label for this gene is yebA [C]

Identifier: 114330058

GI number: 114330058

Start: 27112

End: 27693

Strand: Direct

Name: yebA [C]

Synonym: Neut_0024

Alternate gene names: 114330058

Gene position: 27112-27693 (Clockwise)

Preceding gene: 114330057

Following gene: 114330059

Centisome position: 1.02

GC content: 48.45

Gene sequence:

>582_bases
ATGCATACGATATTAAAAAGCCTGCTTCTCATCGTCGGTTACCTTGTGACGAATACCGCCGTGGCATCGGAGGTCAGGCA
GACTTCTATCATCGAAGGCCCTATTCACACACTCGGCAAACACTCTCATAAGGCAAGTCCTCGGCTCGAGAGCTTGCGAA
AAATGTTTCTTAACACGCCACTGAGCGAACGCGCTCGTATCAATTCAGCCTTTGGCTACCGGCTACATCCCGTTTCGGGC
AAGTGGGCAGGCCATCAAGGTCTTGATTACCCTGCCCCAAAAGGCACCCCCATCCGCGCAACGGCTCAGGGAAAAATCTC
TTTCATTGGTGTTCAAAATGGATATGGCAAAGTGATTTTCATAGAACACGACAATAATTATTCCACTGTCTATGCGCATC
AAAGTCGTTTTAAGAATGGTCTAAGGAAAGGGGCCAACATAGAAAAGGGACAAATCATTGGCTATGTCGGTTCAACCGGA
ACATCCAGTGGCCCTCATCTGCATTACGAACTGCGCGTCAACAATCAACCGATAGACCCCATCCAGGAAAAACGGCAACT
TGCCTCCTATGTCCAAAGATGA

Upstream 100 bases:

>100_bases
CGCAGTGCTGCCAATACTTATTTCCCCACACCAACCAGAGTCGATCCGGCCACAAAAGGCGAGCCACGAGCGAGCACCAG
CCAAATATTTTCTATATGAC

Downstream 100 bases:

>100_bases
GGCTACGTTGTGCCGCCCGAATAGCGGTAGCTGAAAATCACATAGATTGATCGTGCAACAAAGTGAGTGGGGATAATTCC
AATGGCAATAGCGGTGAAAA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MHTILKSLLLIVGYLVTNTAVASEVRQTSIIEGPIHTLGKHSHKASPRLESLRKMFLNTPLSERARINSAFGYRLHPVSG
KWAGHQGLDYPAPKGTPIRATAQGKISFIGVQNGYGKVIFIEHDNNYSTVYAHQSRFKNGLRKGANIEKGQIIGYVGSTG
TSSGPHLHYELRVNNQPIDPIQEKRQLASYVQR

Sequences:

>Translated_193_residues
MHTILKSLLLIVGYLVTNTAVASEVRQTSIIEGPIHTLGKHSHKASPRLESLRKMFLNTPLSERARINSAFGYRLHPVSG
KWAGHQGLDYPAPKGTPIRATAQGKISFIGVQNGYGKVIFIEHDNNYSTVYAHQSRFKNGLRKGANIEKGQIIGYVGSTG
TSSGPHLHYELRVNNQPIDPIQEKRQLASYVQR
>Mature_193_residues
MHTILKSLLLIVGYLVTNTAVASEVRQTSIIEGPIHTLGKHSHKASPRLESLRKMFLNTPLSERARINSAFGYRLHPVSG
KWAGHQGLDYPAPKGTPIRATAQGKISFIGVQNGYGKVIFIEHDNNYSTVYAHQSRFKNGLRKGANIEKGQIIGYVGSTG
TSSGPHLHYELRVNNQPIDPIQEKRQLASYVQR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=134, Percent_Identity=35.0746268656716, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87082174, Length=124, Percent_Identity=35.4838709677419, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1789099, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 21381; Mature: 21381

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTILKSLLLIVGYLVTNTAVASEVRQTSIIEGPIHTLGKHSHKASPRLESLRKMFLNTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
LSERARINSAFGYRLHPVSGKWAGHQGLDYPAPKGTPIRATAQGKISFIGVQNGYGKVIF
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEE
IEHDNNYSTVYAHQSRFKNGLRKGANIEKGQIIGYVGSTGTSSGPHLHYELRVNNQPIDP
EEECCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCH
IQEKRQLASYVQR
HHHHHHHHHHHCC
>Mature Secondary Structure
MHTILKSLLLIVGYLVTNTAVASEVRQTSIIEGPIHTLGKHSHKASPRLESLRKMFLNTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
LSERARINSAFGYRLHPVSGKWAGHQGLDYPAPKGTPIRATAQGKISFIGVQNGYGKVIF
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEE
IEHDNNYSTVYAHQSRFKNGLRKGANIEKGQIIGYVGSTGTSSGPHLHYELRVNNQPIDP
EEECCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCH
IQEKRQLASYVQR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]