| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 114048569
GI number:
Start: 3657401
End: 3658126
Strand: Reverse
Name: Not Available
Synonym: Shewmr7_3078
Alternate gene names: NA
Gene position: NA
Preceding gene: 114048570
Following gene: 114048565
Centisome position: NA
GC content: NA
Gene sequence:
>726_bases ATGCAATCAAAACGCGGTCGTCTCGATAGATACCTTGCCGTTAAGCTACAAATTCACCGTAAAGCCGTGCGAGAACTCTT GTTGGCGGAGCGAGTGTATGTGGATGGCGCGCCTGCGAAAGCGCTCGATCTGCTGGTGGATGAATTTTCCCACATAGTGT TTGATGGACAAGTCTTACAGGCCAACCAGCCTGTGTATCTTATGCTGTATAAGCCCGTTGGCGTGGTGAGTGCAACCAAA GACAAAGAGCATCGCACTGTCATTGATTTGCTCGATTGCGATACTCGCCAAGAGCTGCATATTGCGGGTCGGTTAGATTT AAACTCTTCGGGCTTATTGCTGCTGACCAATGATAGCCGTTGGTCCGAGGCGCTCATGTCGCCAGAGCAAAAAGTGGATA AAGTGTATCGGGTGACTCTGGCAAATCCTTTGAGCGATGAGTATATCGCGGCATTTGCACAGGGCATGTATTTTGGCTTT GAAGATATCACTACTCAGCCGGCAAAGCTTGTTATCCTCGCCCCTCACGTTGCAGAGGTGACCTTAAGGGAAGGTAAATA CCATCAAATCAAGCGGATGTTTGGCCGTTTTCGTAACCCTGTGCTGGGATTACACCGACTTTCTATCGGTGAGATTACCC TAGATGAAGCCTTAAAACCGGGCGAGAGTCGTATGTTGACGGCGCAGGAGGTCGCATCTATCTATCTTACGACGAAGCCT GATTAG
Upstream 100 bases:
>100_bases TTGCCGATATCGCCACTGTAAGCCGTGAAGAGCATATCATCGATGGCGCTCGTCGCTGCGCCTATCGCATTGCGCCTTTA TCTTAGAGCAGGGTGGAGTG
Downstream 100 bases:
>100_bases GTTAGTACTTGTGATAAGTGTTCAGCCACCTTGTCTTATGAGAAGGTGGCTTTGGTTTTGAGTCAGTTAACTATGATTAT AAATGTACAGCTTTATAGCT
Product: pseudouridine synthase, Rsu
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>241_residues MQSKRGRLDRYLAVKLQIHRKAVRELLLAERVYVDGAPAKALDLLVDEFSHIVFDGQVLQANQPVYLMLYKPVGVVSATK DKEHRTVIDLLDCDTRQELHIAGRLDLNSSGLLLLTNDSRWSEALMSPEQKVDKVYRVTLANPLSDEYIAAFAQGMYFGF EDITTQPAKLVILAPHVAEVTLREGKYHQIKRMFGRFRNPVLGLHRLSIGEITLDEALKPGESRMLTAQEVASIYLTTKP D
Sequences:
NA
Specific function: NA
COG id: COG1187
COG function: function code J; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA