| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114048523
GI number:
Start: 3593656
End: 3597306
Strand: Reverse
Name: Not Available
Synonym: Shewmr7_3032
Alternate gene names: NA
Gene position: NA
Preceding gene: 114048524
Following gene: 114048522
Centisome position: NA
GC content: NA
Gene sequence:
>3651_bases ATGAAATTTAATCAATACTTATTTGCTGGTTTTGTAGTGGCTTTAGCTGTTCCAGCCCATACTTTGGCGGATGATACCGA TATCTATCTCAATCCAGCTCAAAATAATATCAGGCCACAAGTACTTATTATTTTTGATAATTCAGCCAGTATGGACACTA TGGTTGAGGGGTTACCGGGTGGATATAAGCCAAATGTGACATATACGCCATTAGACAGTGCTAACTCTTATCAAGATGAT ATGATTTATTTTACGGTGGGAACGGGATTAGATGAGTCGGGTTTAGGGATACCTGATAGTCCATCGGAAACAAATCGATT CAACCTCAAGGTTAATGCTTGTAATGAAGCAACAAAAGCTTTAACAGACTATGGTCGTTTTTCTGGCCATTTCGGTGAAT ACTCCACCAATGGTAATGGGAAAGGGACTTGGCAATTGGTTAAAGAAAACTCAGGTAATGAAGTCCAAAAACCGATTGAC TGTTGGGAAGATATTTTAGCTACAAACTCGAGCAACAATAATGTTCAGTTTACTGATACTGTTTCTGCGACAGGTTATCC ACAAAATAGTGTGGTAATTGGTAGTGGTAACAATGCTCTTTATTCTCCTTGGGGGGCAAAAGATTCAGCTAGTGCAGCTA ATTTGAGTGGTGGAACGCTAATAACGCTTTATACAGCTAATTATTTACGTTGGTATCGACATTACCAAAAAGATGTGGCA AGTGGTACTACGGATCCTAATTCTCAGCAAACAAGACTCGCAATAGCTAAAGATGCTATTTCTAGTGTGATAAGCACCGT TCCTTCAATTGATTTTGGTTTGGCCGTATATAATATGAATTACCCCAGAGAATATGATAGGGATGGTGGTCGTATTGTTG CGGGGATTAAATCCCGAACCGCAGCAGAAAAAACTACACTGATTAATACAATTACCCAATTGCCAGCGGATACAAATACC CCCCTATGTGAAACCTTATTTGAAGCTTACAGTTATTTTAGTGGTGGGAAAATACAGTTTGGACACTCAGATTCAAACTA TAAAGATGCTAGTAATAAAATAGATTATACGGCTAATCAACCAAAGTATGATACTAGTATTGAATCCAATGGCAGTTATA TTTCTCCGTTATCTAAATGTAATAAAGTAGCTCATATCATTTATATTACCGATGGTGCACCTGTACTTGATGATGCTGCT AATGACTTGATTAAAGGACTAGGAGGGACACCTTATACATATAATTCTTCGGGTAAAAGCAGTTATTTGCCAGCATTAGC AGGGTATATGTTTAATCACGATATGTCGTCAGCTGATGGTTTTCAACGAGTAATCACTCATACGATTGGTTTCAGTTTAG GTGAGGATAAGGATGCCGCAGAACCTTTATTAATTGAAACTGCTAAACGTTCGGTTGATTCCAAAGGTGAGGTTTGGGGG ACTTATTCCCCAGCTGATAATACCGTTGAATTAGTTGCCGCAATTACAAAGTTGGTTGCAGAAATTAATAAAACAGGGCA GCGATTTTCTGCACCTGGGGTGGCATTCAGTAGTGCAGACCCTACACGTACTCTTGAGTCAGCCTATTACGCATTATTTG AACCATCACAAAGTCCTAAATGGACGGGGAATTTGAAGAAATTAAAAGTGAACTCTTCTGGTGTTTTAGTCGACAAAAAT AACAAAGCTGCAATTGATTCCTCAGGAGGTATTACTTCGAGTGCTTGCACCATTTGGAGTACATGTAGTACTGATGGAGA TGTAGGCTATGTCGACGAGAGTGGGATTATAGATGGCGGTAATGTTGTCTCTGCAGGTGGTGCTGCTAGACAAATTGATC CTAATACTAGAACAATGCTAAGTGATCTTGACTCTGGACTTGTTGCTTTAACGGTTGCAAATGCTAGTAAATTTGCAGGC GGCTCTCGTGAGTTAGCGGCGTTGTTGGGATTAAATGTCACAACAACAGATTCTGATGCCGCAGTCACTGCAGAATTGGA TAAAGCTTTTGCTTGGATTTATGGCAAAAATGTAGATGTTGCTTCAACCGATGCGAATGGCAATCCGATCTATACTTCAA TAGGCGTAGGATTAGGTGGTACTCGTAGTGGCAATATTCGCGCAGATATTATGGGCGACCCTTTGCATTCCCAACCTTTA GCCATCGATTTTGGTGACCATACCATGATTTATGTGGGAACAAATCATGGGGTGATGCACGCATTTAATGACTCTGGGGA TAGTGTCGCTGAGAGTTGGGCATTTATGCCTAATCAGTTATTTTCAAATTTAAGTACTATTCGAAGAAATGATTATTCCT TTGGTCATTCGGAATATGGCTTAGATGGCTCACCAGTGTCTTATATTGAAAGGGATGATTCAGCGATTAAGACCGCTTGG TTGTATTTTGGAATGCGTCGTGGTGGTCAATCATATTTTGCAATGGATGTAAAAGGAGCGACCCCTACACTGAAATGGAC AATAAGTAATACTACTGCAGGCTTTAGTAATTTAGGTCAAACATGGTCAACTCCAGTCGTTACAAAAGTCCCGATTAATG ATGGAAAACCTGTTTTAATCTTTGGAGGGGGATATAATCCGGGCTACGATGCTGCGGGTGGAAAAAATTCATTTGGTCGA GACGTTTATATAGTCGACGCTGATACCGGAACACTTCTACACACTTTTGGAATTGGTGGTACTGATACGCCATTACCTAA TATTACAGATTCTATCGTGGGCTCAATTGCAACATTAGACAGTAATGGTGATGGTATAACCGATAGATTGTACGCCTCGG ATTTGGGCGGTAATGTTTGGCGCATGGATATGCCTGCTTCCGATAAAACCAAATGGAGTGCGTTTATGTTTGCTTCTGCT GGTGGTGCTTATGATACATCGGATGATCGTCGATTCTTTTACGAGCCAACAGTCGCGCAAACCTACTTTACTGATACTAC AGAAGTCATGGTAACAGACGCTGATGGAAATACTGAAAAGGTGATTTCTTATCAAAATGTACCCTATGATGCTGTTACAC TTGGCTCTGGCAATCGTGCAGATCCACTAGGAACTTCAGTAAACGATAAATTTTTTGTCATACAGGATAGGAATGTTGCA ACGCAGACATTTGGTAGTGCTACAGGGCAGACAGCTGTACCTGATCCAATTATTTACCCAGATAATTTATATGATGTGAC TCAAGCTGCACCTTCAACTGAATCTGAAAAAATTGCATTTAGTGCAAAACGTGGTTGGTATTACAGTTTCCCTGGACTTG GAGAGAAAAGTTTATCTCCCTCAGTTATCATTAAAGGCAAAGTATATTTTACCTCATTTACTCCAACTGGCCCTGCACCA GATCCTGAAAGCTGCTCTGTCGCATCCGTCGGTAAACTGTATACATTGGATTTGCATACAGGTTTAAGGTTTTCTCAAAA TTATTACATAGATATATGTGATAATTGCATTCCTCAACCACCTAAGATCATTACTCCACCTATCGATCCTGAGCATCCAG AGGTTATCCCTGACCCTGTATTAATTATTGGTGCGGGAACTTGTGATGAGAAGGGAGAGAATTGTACTGGTACAGTTAAT TTGGATTCAGGCTTAGAAACGAACAAAATTTATTATCATATAAATGAGTAA
Upstream 100 bases:
>100_bases GAGTGGAAATTTCTAGCGCTGTTGCATTTGGTAGGGATAATGTGGGGCAACTCACTGTTATTACAGGTATCCAGCAAGAA GTGTTAACTGGGAGTGGGTC
Downstream 100 bases:
>100_bases ACAACTTAATGAACACTGAACAACAAAAGGGATTTACATTAATCGAAGTTATGATCACTGTCGTGATTATTGGGATTTTA GCCTCTATAGCTTATCCTTC
Product: type IV pilin biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1216_residues MKFNQYLFAGFVVALAVPAHTLADDTDIYLNPAQNNIRPQVLIIFDNSASMDTMVEGLPGGYKPNVTYTPLDSANSYQDD MIYFTVGTGLDESGLGIPDSPSETNRFNLKVNACNEATKALTDYGRFSGHFGEYSTNGNGKGTWQLVKENSGNEVQKPID CWEDILATNSSNNNVQFTDTVSATGYPQNSVVIGSGNNALYSPWGAKDSASAANLSGGTLITLYTANYLRWYRHYQKDVA SGTTDPNSQQTRLAIAKDAISSVISTVPSIDFGLAVYNMNYPREYDRDGGRIVAGIKSRTAAEKTTLINTITQLPADTNT PLCETLFEAYSYFSGGKIQFGHSDSNYKDASNKIDYTANQPKYDTSIESNGSYISPLSKCNKVAHIIYITDGAPVLDDAA NDLIKGLGGTPYTYNSSGKSSYLPALAGYMFNHDMSSADGFQRVITHTIGFSLGEDKDAAEPLLIETAKRSVDSKGEVWG TYSPADNTVELVAAITKLVAEINKTGQRFSAPGVAFSSADPTRTLESAYYALFEPSQSPKWTGNLKKLKVNSSGVLVDKN NKAAIDSSGGITSSACTIWSTCSTDGDVGYVDESGIIDGGNVVSAGGAARQIDPNTRTMLSDLDSGLVALTVANASKFAG GSRELAALLGLNVTTTDSDAAVTAELDKAFAWIYGKNVDVASTDANGNPIYTSIGVGLGGTRSGNIRADIMGDPLHSQPL AIDFGDHTMIYVGTNHGVMHAFNDSGDSVAESWAFMPNQLFSNLSTIRRNDYSFGHSEYGLDGSPVSYIERDDSAIKTAW LYFGMRRGGQSYFAMDVKGATPTLKWTISNTTAGFSNLGQTWSTPVVTKVPINDGKPVLIFGGGYNPGYDAAGGKNSFGR DVYIVDADTGTLLHTFGIGGTDTPLPNITDSIVGSIATLDSNGDGITDRLYASDLGGNVWRMDMPASDKTKWSAFMFASA GGAYDTSDDRRFFYEPTVAQTYFTDTTEVMVTDADGNTEKVISYQNVPYDAVTLGSGNRADPLGTSVNDKFFVIQDRNVA TQTFGSATGQTAVPDPIIYPDNLYDVTQAAPSTESEKIAFSAKRGWYYSFPGLGEKSLSPSVIIKGKVYFTSFTPTGPAP DPESCSVASVGKLYTLDLHTGLRFSQNYYIDICDNCIPQPPKIITPPIDPEHPEVIPDPVLIIGAGTCDEKGENCTGTVN LDSGLETNKIYYHINE
Sequences:
NA
Specific function: NA
COG id: COG3419
COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA