| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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The map label for this gene is dnaE
Identifier: 114048185
GI number:
Start: 3185302
End: 3188778
Strand: Reverse
Name: dnaE
Synonym: Shewmr7_2693
Alternate gene names: NA
Gene position: NA
Preceding gene: 114048186
Following gene: 114048184
Centisome position: NA
GC content: NA
Gene sequence:
>3477_bases ATGTCCGATCCTCGTTTTGTGCATCTTCGTGTCCACAGTGACTTCTCTATGTCCGATGGTGTGGCTAAGGTCAAACCCAT CCTCGCCCAAGTTGAGGCTAAGGGTATGGCTGCGGTGGCCTTAACGGATCAAAACAACCTCTGCGGTCTGGTCAAGTTTT ATGGTGGTTGCCATGGTGCGGGGATTAAGCCGATTATTGGCGCGGACTTTTGGATGCAAGTGCCGGGGTTTGATGACGAG TTTTGTGCCTTAACCATTATTGCGATGAATAATGATGGCTATCAAAATCTCACCCAAATCATCAGCCAAGCCTATCTACG GGGCCATGTGGCTGGGCGGGTGGTGATTGACCAAGAGTGGCTTGTCACCTACAACGAAGGCATTTTATTGCTGTCTGGTG GGAAAGAAGGGGACGTGGGTAAGGCGCTGCTTAAGGGCAACAATACTCAAGTCGAGTCCTTATGCGAGTTTTATCAGCAA CATTTTGAAGGGCGTTATTACCTCGAATTATTGCGCACGGGGCGCCCTGATGAGGAGCGTTACCTGCATATGGCGGTGGG GCTCGCGCAGGAAAAGGGCATTCCCGTGGTCGCCACCAATCAGGTGGTATTTTTAAAACCCGAAGACTTCGAGGCCCATG AGATCCGCGTTGCGATCCACGATGGTTTTACGCTTGCCGATCCCCGCCGGCCTAAAAAATACAGCGAGCAGCAGTACCTT CGCAGTGAAGAGGAAATGTGCGAGCTGTTTGCTGACATTCCTGCCGCGCTCGAAAATACCGTTGAAATCGCCAAGCGTTG CAACGTTACCATTCGCTTATACGAATACTTCTTACCGAATTTCCCCACCGGCGATATGTCGATTGAGGATTTTCTAGTTG ATTGCTCTAAGAAGGGGCTCGAAGAGCGTTTAGAGTTCTTATTCCCCGATCCACAAGTGCGCGCCGAGCGCCGCGGTGAA TATGACGAGCGTCTCGATGTGGAGCTTAAGGTTATCAACCAGATGGGCTTCCCCGGTTACTTCCTTATCGTAATGGAGTT TATCCAGTGGGGTAAGGATAACGGCATTCCTGTGGGGCCTGGCCGTGGTTCGGGCGCTGGCTCGCTTGTGGCCTATGCCC TTAAGATTACCGACTTAGACCCCTTAGAATTCGACCTGCTGTTCGAACGTTTCTTGAACCCAGAGCGGGTATCTATGCCC GACTTCGACGTCGACTTCTGTATGGATAGACGCGATGAGGTGATTGACCACGTGGCCGAACTCTATGGCCGTGAGGCGGT ATCACAGATCATTACCTTTGGTACCATGGCGGCCAAGGCGGTTATCCGCGACGTGGGTCGTGTACTCGGCCATCCCTATG GCTTTGTGGACCGCATTTCTAAGCTTATTCCTCCAGAGCCTGGCATGACACTCGCCAAGGCCTTTGAGGTGGAACCTGCG CTGCAGGAGTCCTACGATGCCGATGAGGATGTGAAAGATCTTATCGACATGTGCCGTAAACTCGAGGGGGTGACCCGTAA CGCCGGTAAGCATGCGGGGGGCGTGGTGATTGCGCCCACCAAGATCACCGACTTCTCGCCGCTTTATTGCGACGCCGAAG GTAAAAACCCGGTAACCCAGTTCGATAAGAACGACGTGGAAACCGCCGGCTTAGTCAAATTCGACTTCTTAGGGTTAAGA ACCCTCACCATCGTCGACTGGGCGCTGGAGATGATCAACAAGGTGGAGGTTAAAAACGGCCGTCCACCGGTGCGGATTGA GGCGATTCCCCTAGACGACCCAGCTTCGTTCCGCTTGCTGCAACGCTATGAAACCACCGCGGTATTCCAGCTCGAATCCC GTGGTATGAAGGATTTGATTAAGCGTCTGCAACCCGACTGTTTCGAAGATATGATCGCACTCGTGGCATTGTTCCGCCCG GGGCCTCTGCAGTCGGGCATGGTGGATAACTTTATCGAGCGTAAGCATGGTCGTGAAGAGGTGTCTTACCCTGATTCTCA ATACCAGCATGAATCCTTGAAGGAGCTGTTGTCGCCCACCTACGGCATTATTTTGTACCAAGAGCAGGTGATGCAGATTG CGCAGGTGCTATCGGGTTATACCTTAGGCGGCGCGGACATGCTGCGCCGCGCTATGGGTAAGAAAAAGCCCGAGGAGATG GCCAAACAGCGCGGTACCTTTAAAGAAGGGGCGATTAAGAACGGCGTCGATGGCGAGTTGGCGATGAAAATCTTCGACTT AGTGGAAAAGTTTGCGGGCTACGGCTTTAACAAATCCCACTCCGCTGCGTACGCGCTCGTGTCCTATCAAACCCTGTGGC TCAAGACTCACTTCCCGTCGCAGTTTATGGCGGCGGTAATGTCTGCCGATATGGACAACACAGACAAAATCGTCACCCTA GTGGATGAATGTGAGCGCATGGGACTCACCATTATTCCGCCGGATGTGAACAAAGGTCTGTTTAAGTTTACCGTCGATGA TGATCTGCGTATCGTTTACGGCATCGGCGCCATCAAAGGTGTGGGTGAGGGGCCGGTTGAGTCGATTCTTGAGGCGCGTA AGGACGGCCCCTTTAAAGATTTATTCGACTTTTGCGCCCGTATCGATCTTAAAAAACTTAACAAACGGGTGATTGAAAAG CTTATCTGCGCGGGTGCCTTAGATGCGCTTGGGCCGCACCGCGCCTCTATGATGGCCACCTTGCCCGAGGCGATAAGCGC CGCCGATCAGCATGCGAAGGCCGAGGCCATTGGCCAGCATGATATGTTTGGTCTGCTTAACAGTGACCCTGAGGACAGCA AGCAACAGTTTGTCGAATGCACTCCGTGGCCCGATAAAATTTGGCTCGAAGGGGAGCGTGAGACCTTAGGTCTATATTTA ACTGGTCACCCGATTAATCAATACCTTAAAGAGCTTAAGCATTACACCTCTGGGCGCTTAAAGGATGTGCATCCAACCGA TCGCGGCAAAACCGTGAAGGCGGCAGGCCTTGTGGTTGCAACTCGGGTGATGCTCACTAAGCGTGGATCGAAAATGGGCC TGCTGACGCTAGATGACAAGAGTGCACGCCTCGAGGTGATGCTCTTTACCGAAGCTTTTGAGAAGTTTAACCATCTGCTC GAGAAGGACAGGATCCTGATCTGCGAAGGTGAAGTCAGCTTCGATGATTTTGCCGGTGGCAACCGCATGACGGCGCGCAA TATTATCGATATCAGCGAGGCGCGCAGCCACTTTGCCAGCGCCTTAGAAATCGATTTAGACGCATCGCAGTTAAATCCAA GCGTGCTCGAAAGTATCGAGCAATCGATAAGCCCGTGGCGCAACGGTGCCGTACCCGTGGTGATTAACTACAGTCAAGCG CAGGCCAAGGGCCAATTTAGGTTGGCGGAACATTGGCGAGTCAACCCCAGCGATGAATTGGTTTTTGCCCTTGAGAGCCT CTTGGGGCCAAATAAGGTGCGGATCCTGTTCCCCTAA
Upstream 100 bases:
>100_bases CATTTCAGCTTGAGAGCGAAGTCACTAGCCCCAGGGCTGTGACTTTGCTAGTCTGCTTTTTTAGTGATTGTTAACCTGCT ATTCAAAGATAATTCTAATT
Downstream 100 bases:
>100_bases TCGATAACCTGACAAAGGCTTGGGGTTAGCTAGGGATAATTGAGCATCCGCGAGCGATGGATTTTATAGGGTGAGTGCAA TGGCGGCGATGGAACTGAGT
Product: DNA polymerase III subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1158_residues MSDPRFVHLRVHSDFSMSDGVAKVKPILAQVEAKGMAAVALTDQNNLCGLVKFYGGCHGAGIKPIIGADFWMQVPGFDDE FCALTIIAMNNDGYQNLTQIISQAYLRGHVAGRVVIDQEWLVTYNEGILLLSGGKEGDVGKALLKGNNTQVESLCEFYQQ HFEGRYYLELLRTGRPDEERYLHMAVGLAQEKGIPVVATNQVVFLKPEDFEAHEIRVAIHDGFTLADPRRPKKYSEQQYL RSEEEMCELFADIPAALENTVEIAKRCNVTIRLYEYFLPNFPTGDMSIEDFLVDCSKKGLEERLEFLFPDPQVRAERRGE YDERLDVELKVINQMGFPGYFLIVMEFIQWGKDNGIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP DFDVDFCMDRRDEVIDHVAELYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPEPGMTLAKAFEVEPA LQESYDADEDVKDLIDMCRKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDAEGKNPVTQFDKNDVETAGLVKFDFLGLR TLTIVDWALEMINKVEVKNGRPPVRIEAIPLDDPASFRLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRP GPLQSGMVDNFIERKHGREEVSYPDSQYQHESLKELLSPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRGTFKEGAIKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPSQFMAAVMSADMDNTDKIVTL VDECERMGLTIIPPDVNKGLFKFTVDDDLRIVYGIGAIKGVGEGPVESILEARKDGPFKDLFDFCARIDLKKLNKRVIEK LICAGALDALGPHRASMMATLPEAISAADQHAKAEAIGQHDMFGLLNSDPEDSKQQFVECTPWPDKIWLEGERETLGLYL TGHPINQYLKELKHYTSGRLKDVHPTDRGKTVKAAGLVVATRVMLTKRGSKMGLLTLDDKSARLEVMLFTEAFEKFNHLL EKDRILICEGEVSFDDFAGGNRMTARNIIDISEARSHFASALEIDLDASQLNPSVLESIEQSISPWRNGAVPVVINYSQA QAKGQFRLAEHWRVNPSDELVFALESLLGPNKVRILFP
Sequences:
NA
Specific function: NA
COG id: COG0587
COG function: function code L; DNA polymerase III, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA