| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114047967
GI number:
Start: 2928887
End: 2932174
Strand: Direct
Name: Not Available
Synonym: Shewmr7_2475
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047964
Following gene: 114047968
Centisome position: NA
GC content: NA
Gene sequence:
>3288_bases ATGAAACGTATGTTAATCAATGCAACTCAATCAGAAGAGTTGCGTGTTGCCCTGGTTGACGGGCAACAACTGTACGATCT GGATATTGAAAGTCCTGGTCACGAGCAAAAAAAATCCAACATTTACAAGGGTAAAATCACCCGCGTAGAACCCTCTTTAG AAGCCGCTTTCGTTGACTATGGTGCAGAGCGCCACGGCTTCTTACCGCTAAAAGAAATCGCCAGAGAGTACTTCCCTAAA GGTTATTCTTTCCAAGGTCGCCCAAACATCAAAGAAGTGGTCAGTGAAGGACAAGAAGTTATTGTTCAAATTGACAAAGA AGAGCGCGGTAACAAAGGTGCTGCACTGACAACCTTTATCAGCCTTGCAGGTTCTTACTTAGTCTTGATGCCAAACAACC CTCGTGCAGGCGGTATTTCTCGCCGTATCGAAGGTGATGAGCGCACCGAATTAAAAGAAGCCATGGCCGATTTAGAAGTA CCTGCGGGTATGGGACTTATCGTGCGTACCGCGGGTGTTGGCAAAGAATCAGCCGAATTGAAGTGGGACTTGAAAGTCCT GCAACACCACTGGGCCGCCATTACCGAAGCCGCACAAAGCCGCAATGCACCTTTCTTAATTCATCAAGAAAGTAACGTTA TTGTGCGTGCAATTCGTGATTATCTGCGCCGTGATGTGGGCGAGATTTTAATCGATCACCCACGTATTTACGAAGAAGCC AAGCAACATATCGCACTGGTACGCCCTGATTTCGTTGAGCGTGTAAAACTCTACGAAGCCGAAGTGCCATTATTTACTCA CTTCCAAATCGAGTCGCAAATTGAATCCGCGTTCCAACGTGAAGTGCGTCTGCCATCGGGCGGCTCGATTGTTATCGACC CAACGGAAGCATTAACCTCAATCGATATCAACTCTGCCCGCGCAACGAAGGGCGGTGATATTGAAGAAACCGCACTAAAT ACCAACCTTGAAGCCGCCGATGAGATTGCCCGTCAATTACGTCTGCGTGACTTAGGTGGTCTGGTCGTGATCGACTTTAT CGATATGACGCCAGTGCGCCATCAACGTGAAGTTGAAAACCGCCTACGTGATGCCGTGCACCATGACCGTGCCCGCGTAC AATTAGGCCGCATTTCTCGCTTTGGTCTGATGGAAATGTCACGCCAACGTCTGCGTCCATCGTTAGAAGAATCGGCTGCG CATATCTGCCCTCGCTGTCATGGCCAAGGCACGATTCGTAGTACCGAATCTTTAGCACTGTCGATTCTGCGTTTGATGGA AGAAGAAGCCATCAAGGAAAACACCTCACAAATCGAAGCTATCGTGCCTGTCGATGTGGCGGCCTTCCTGCTGAACGAAA AACGCAAAGCGATTCGTATCACCGAACAACGCCATGATGTAGAAGTCTATGTGATCCCAGATCCACATATGATGACTCCT GATTATCGCGTTATTCGTCACCGCACTGACGATGAAATCGATGAATCTAGTTACAAGCGCATCGAACAGCCAGAAGCCAA GTTATACGAACCCCGTAAACTGGAACGCACTGCTGCGCCAGCACCAGCACTAAAAGGCTTCACTGCACCACAGAAAGTCG AACAAGCCGCTGCACCTGTTGCCAACAAAGTGGAAGCCACCGAGCCAGGTTTCTTCAGCAAACTGTTCAGTGCCATTGGC GCTTTCTTCAGCTCAAGCGATAAGCCTGCAGCTGAAAAGACCACTGAAACCAAAAAGTCTGACAGCCAAACGGCCAATGC GAACCGTCGTAACCGTCGTAATGACACTCGCCGCACTCGCAATAACCAAGATGCTGACAAAGCGAAAGAAGGCACCCGCG AACCACGCACTCGCAATGCCAAGAAAGCGGCCGATGCACCTCAGGCTCAGGAGCGTCCCGCTCGTGAAAAAGACGAGAAT GCAAAACGCACTAAGCCAGAGCCTAAGAGCCGTAATCAAGCACCGAAAGAAGTGGTAGCAGAGTCTCAAGACGACACGCC AAAGCAAGAAGTGGCCCGTGAGCGTCGTCAGCGTCGTAATATGCGCCGTAAAGTACGCATCGATAACGCCAATGAAACCA CCGAAGCGCCAATTCAAGAAGAAGTGGTTTTAGCCGAAGTGGCCGCAGTCAATGCAGCCAATACTGAGGTTGCAGTAGAG ACACAAGCGGAAACGAAAGCACCGCGCTCACGTCGCCAGCCACGCAAAGAAACCGCGGTTGCCAATGAGACAGCAGAAGC GACTGATGCAGTGAGCCAAGTGGAAGCAAGCACTGAAGTTACCGCTGACAAGCCAGTGGTTGAAAACCGTGCTGATGCCC CTGCTGACGTAACCGAAGTGAAGACCGAAGCCGAGACCGATGCGGATAACGCAGAACTCAGTGCCGATGCAGATGATAAA GCGAAACGCGAATCTCGCGATGGACAGCGTCGTAGCCGCCGCAGCCCACGTCATTTGAGAGCCGCGGGTCAACGTCGTCG CCGTGATGAAGATGAGCAAGGCGCCTCTGCACCTGCGCAATTCGTACCAAACGATGCGCTAGGTGAAGCTCAAGACTACC CAGCGCCAACCGCTCAAACTGCAGAAGCAGCTGAGACCACAGAAGCAAAAGCAATTGAAGTCGCCGCAGAACCGACAGTG ACATCTCCTGCAGCTGTAGTCGAAACGGCAGATGTCATTGTAGTTGCTGAAACAACCGCCAATAACGCTGTTGAGACTGA AGTTATTGAGACAGTAGCTACAGAGCAAGTGGCTGAGATTAAAGCTGAAGTTGCAGTAACAGAAGCTCCTGCTCACACTG CGGTAAACAACAAGCCAGAGACGAGCGTTAAGGCTAAAGAAGTTGCTGTTGAGCCAGCTAAAACTGTAGAAGCGGTTACA GAAGCCATTGTGATCCATGCCGAAACTCCAGTTGCTCAAGCGAAAGCAGAAACTGTTGCAGTTGAAGCGGTAGCGCCCGA AGTGGAAAAAGCCGAAGTGAAAGAAGCCGTGAAATCAGTGGCCTCAGCTCCAATGGCAAAACCTGCGCCAATCGTTAAAC CACAGGCGAAACCAGTTGTCACTCAAGCTGTCGCAGCCCCTGCAGCTGAAACCGTGGTGAGCAAACCCAAAGCCGCTAGC CGTTTTGGTTCAATGGTGTCATCAGAGATGACCAAGCCGACGGTAGAAGTCAGAACACAGGTAGAAGTGCCAAAAGGCCG CGAGTATGACAATACCGCCTCAGCCGAAGTCACTGCGCCTAAGCTGAAGCAAAGCAATAGCGCCGAATCGGATATGGCTC GTCCATAA
Upstream 100 bases:
>100_bases TAGCCACCAGCCGTGAGGCTTCGTTGACCTACTGCTAGGCCCGTAATGCAGCGAAACGCGATTGTTTGATGACCTCCATT TAAAGAAGAATGACGTCATC
Downstream 100 bases:
>100_bases TCGCCAAGTCGTTGTTAAAAAGCCATGCACTTGCATGGCTTTTTTATTTTCAGCCAATTCAGCCATATTTAAGGTTTAGC TGAATAGGCTTTTTTGTTAG
Product: RNAse E
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1095_residues MKRMLINATQSEELRVALVDGQQLYDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDYGAERHGFLPLKEIAREYFPK GYSFQGRPNIKEVVSEGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKEAMADLEV PAGMGLIVRTAGVGKESAELKWDLKVLQHHWAAITEAAQSRNAPFLIHQESNVIVRAIRDYLRRDVGEILIDHPRIYEEA KQHIALVRPDFVERVKLYEAEVPLFTHFQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALN TNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRLRDAVHHDRARVQLGRISRFGLMEMSRQRLRPSLEESAA HICPRCHGQGTIRSTESLALSILRLMEEEAIKENTSQIEAIVPVDVAAFLLNEKRKAIRITEQRHDVEVYVIPDPHMMTP DYRVIRHRTDDEIDESSYKRIEQPEAKLYEPRKLERTAAPAPALKGFTAPQKVEQAAAPVANKVEATEPGFFSKLFSAIG AFFSSSDKPAAEKTTETKKSDSQTANANRRNRRNDTRRTRNNQDADKAKEGTREPRTRNAKKAADAPQAQERPAREKDEN AKRTKPEPKSRNQAPKEVVAESQDDTPKQEVARERRQRRNMRRKVRIDNANETTEAPIQEEVVLAEVAAVNAANTEVAVE TQAETKAPRSRRQPRKETAVANETAEATDAVSQVEASTEVTADKPVVENRADAPADVTEVKTEAETDADNAELSADADDK AKRESRDGQRRSRRSPRHLRAAGQRRRRDEDEQGASAPAQFVPNDALGEAQDYPAPTAQTAEAAETTEAKAIEVAAEPTV TSPAAVVETADVIVVAETTANNAVETEVIETVATEQVAEIKAEVAVTEAPAHTAVNNKPETSVKAKEVAVEPAKTVEAVT EAIVIHAETPVAQAKAETVAVEAVAPEVEKAEVKEAVKSVASAPMAKPAPIVKPQAKPVVTQAVAAPAAETVVSKPKAAS RFGSMVSSEMTKPTVEVRTQVEVPKGREYDNTASAEVTAPKLKQSNSAESDMARP
Sequences:
NA
Specific function: NA
COG id: COG1530
COG function: function code J; Ribonucleases G and E
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA