| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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The map label for this gene is cpdB
Identifier: 114047096
GI number:
Start: 1869127
End: 1871184
Strand: Reverse
Name: cpdB
Synonym: Shewmr7_1591
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047108
Following gene: 114047095
Centisome position: NA
GC content: NA
Gene sequence:
>2058_bases ATGTTAAATAAAAAACTACTCGCAGTGATGATCACTGCCGCCTTAGGCGTAAGCGCCTGTGGCTCGGATGATGAGCAAAT CGTTCAAGCGGATTTACGTGTATTAGAAACCACGGATCTGCACACAAATATCATGGATTTCAACTACTACAGTGGTAAAG AAGACCCAACAATTGGTCTAGCTCGTACCGCAAGCCTGATCCATGCAGCCCGTAAAGAAGCCAAAAACAGTGTACTCGTA GATAACGGCGACCTGCTTCAAGGTAGTCCTATGGGAGACTACATGGCTAAAGTCGGCCTACAAATGGGCGATGTTCACCC AGCCTATAAAGCGATGAATCTATTAGATTACGAAGTAGGTAATATCGGTAACCACGAATTTAACTATGGTTTAGATTTTT TAAATAAATCACTTCATGGTGCAGAGTTCCCTTATATTAACGCCAACGTCTATTGTGCCGACGATAATGGCTGCTGGAAT GATGTGAAAAAAGGTGAGCATTTATTCACCCCTTATATCATTAAAGAAAAGCAAATCGTCGATAGCGAAGGAAATAACCA AACCATTAAGATTGGTTATATTGGTTTTGTGCCACCACAAATTTTATTGTGGGATAAACAAAATCTGACAGGCAAAGTTA CGGTTGAAGATATTGTGGCGACCGCTAAGAAATATGTGCCTGAAATGAAAGCTAAAGGCGCTGATCTGATTATCGCAATC CCACACTCAGGTATTGGTTCGACCGAAAATCCTGGCGATCCTATGGCAGAGAACGCAACCTATGCCTTGACCTATGTCGA CGGTATTAATGCCATCCTCTTTGGTCACAGCCACTCTATTTTCCCCGATGCCAAATATGCCGACTTACCTAACACAGACG TGACTAAAGGTCTGTTAAATGGTGTACCAGCCGTCATGCCTGGACGCTGGGGTGACAACTTAGGTGTGGTCGACTTTAAA CTCGAACGTAAAGACGGTAAGTGGTCTGTGCTCAGTGCCACCACTAAGGCACGTCCTATCTATGATGGCGCAACCAAAAC ACCATTAGTCGAAGCCGACGCCGCCATCCATGATGCTGTCGCCGCCGAGCACCAAGGGACCCTCGCCTTCGTGGACGAAC CGATTGGGGTTGCTGCCGCCGATATGTATAGCTTCTTGACCTTAGTGCAGGACGATCCAACCGTTCAAATCGTTTCTGAC GCGCAAATTGCCAACGTTAAAGCCAAACTCCCCGAGGCATTAAAAGATCTACCAGTTTTATCGGCCTCTGCGCCATTCAA AGCCGGTGGTCGCCACGGAACAACCAGCGATGCAGACCAATATGTACAAGTCGATAAAGGCGCATTGACCTTTAAAAACG CCGCCGATCTTTACCTCTACCCCAACACTATGGTGGCGGTTAAAGCGACGGGGGCTGAACTGAAAGATTGGCTGGAGTGC TCGGCTAACCAATTCAATCAAATCGATCCAACCAAGACTACGCCGCAGGAGTTAATCAACTGGGATGGTCACCCAACCTA TAACTTCGACGTGCTCGATGGCTTGACCTACAAGATTGATGTCACTCAACCAAGCAAGTTCGACCGCGACTGCGCCGTCG TCAATGCCAATGCTAACCGTATCGTCGATTTAAGCTACACAGATGCCAACGGTAAAGTCTTCACTGGCGAAGAGTTTGCG GCCAAAGAATTTATCGTGGCCTCAAATAACTACCGCGCCTTTGGTGGCAAGTTTGCCGGTACAGGCAGTGATCATGTGGT ACTCGAACTGCCAGATACTAACCGTGAAGCCTTAGCGGCCTACATCACGGCGCAATCTCAGTTCAACGAAACCACAGGCA AGTATGATGGCATGGTCAACCCAAGTGCTGACTACAACTGGGATTTCAAAACCATCAGCACCAATGTTGCGTTAGATATT CGCTTCCAGACCCAAGATAGCGATAAAGCCGCTGCCTTTATCGAAGCCAATAAACAACGCGAAATGACCAAGATGAGTAA AGATGAACTCGGTTTTGCCGTGTACCGCATCAACCTAAGCCAAGATAAAGCGAAGTAA
Upstream 100 bases:
>100_bases GCTGTAACTTAACGGTTCATTCGCCATCAATTAACAGGATGATGGGCATGTTCTTAAAAGAACATGTATTAGGGTCAAAT AAATATAAATAGAGAAAACG
Downstream 100 bases:
>100_bases TTGGCGTTATTACGCTTAGGTTAAGCCAATATCAGGCTAAACTCAGTCTCGTACTTAGACAAGAAAAGGCTCCCAGTGAG CCTTTTCTTTATTCTAGATC
Product: bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>685_residues MLNKKLLAVMITAALGVSACGSDDEQIVQADLRVLETTDLHTNIMDFNYYSGKEDPTIGLARTASLIHAARKEAKNSVLV DNGDLLQGSPMGDYMAKVGLQMGDVHPAYKAMNLLDYEVGNIGNHEFNYGLDFLNKSLHGAEFPYINANVYCADDNGCWN DVKKGEHLFTPYIIKEKQIVDSEGNNQTIKIGYIGFVPPQILLWDKQNLTGKVTVEDIVATAKKYVPEMKAKGADLIIAI PHSGIGSTENPGDPMAENATYALTYVDGINAILFGHSHSIFPDAKYADLPNTDVTKGLLNGVPAVMPGRWGDNLGVVDFK LERKDGKWSVLSATTKARPIYDGATKTPLVEADAAIHDAVAAEHQGTLAFVDEPIGVAAADMYSFLTLVQDDPTVQIVSD AQIANVKAKLPEALKDLPVLSASAPFKAGGRHGTTSDADQYVQVDKGALTFKNAADLYLYPNTMVAVKATGAELKDWLEC SANQFNQIDPTKTTPQELINWDGHPTYNFDVLDGLTYKIDVTQPSKFDRDCAVVNANANRIVDLSYTDANGKVFTGEEFA AKEFIVASNNYRAFGGKFAGTGSDHVVLELPDTNREALAAYITAQSQFNETTGKYDGMVNPSADYNWDFKTISTNVALDI RFQTQDSDKAAAFIEANKQREMTKMSKDELGFAVYRINLSQDKAK
Sequences:
NA
Specific function: NA
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA