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The map label for this gene is yagK [H]

Identifier: 113970030

GI number: 113970030

Start: 2005690

End: 2006352

Strand: Direct

Name: yagK [H]

Synonym: Shewmr4_1691

Alternate gene names: 113970030

Gene position: 2005690-2006352 (Clockwise)

Preceding gene: 113970029

Following gene: 113970039

Centisome position: 42.62

GC content: 32.58

Gene sequence:

>663_bases
ATGCGTAAAAATAGTAATTTAAATTTATTACATTGTGTCGAGTATTTTGGCTTACCTGTTTTGAAGTTTAAAAATGGTGT
TTATGAGGAGTATTTGAAGAGAAATTATAATGTTATTAACCAGACTCTAATTATGTACTCAAAGGTTTTCGCCGTGAGAG
TTGACTTGAGGTTTCCTGATCAATATAAGTCATATGACAATAGTGCAGTTACTCGATTTGTCGAATCATTGAAATCACAA
GTTAAGGCTGATTATATTGCAAAAACTAAACATTCAGACGGGTTTGTACATAAAAGCGATGTACTGTACATCTGGGTGCA
AGAAACTGGAGAACATAATAAACCACACTACCATCTTTGTTTGTTTTTTAATGGTAATGCCTACAGAAGTTTAGGTAAGT
TTGAACTTGGTAGATCTAATATGTATAACCGAATCGTTAAAGCTTGGGCGAGTGCATTAGCCATAAAAACAATTAATGCG
CAAGGTTTAGTTCATATTCCAAAGCATTCTTGTTATTTCTTGGATAAAACTTTGCCTTTTACTAAAACTTTTGAATTTCG
AGTTTTATTTATTCGCTTAAGTTATTTTGCTAAAGTGGATAGTAAATACTATGGTGATAGACGACATCATTATGGTTGTA
GTAGGACGCCAGACATCAAATAG

Upstream 100 bases:

>100_bases
ACTTTTTAGATGTTAGGTCTGGTTTTTCTGTTTTGATTATTTCCGATATTTATAGGTGTAATAAATTCTATTCTAGAAAG
AATTATGGGTGATTTTATCT

Downstream 100 bases:

>100_bases
AGGCAATTCATAATTCTGAATTAGTTCTGTTAGCAATGTACGAGTGAATTGTTTTCCATTTTGTAAATGATATTAGTAAT
GGGGGCGTTGACCAGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRKNSNLNLLHCVEYFGLPVLKFKNGVYEEYLKRNYNVINQTLIMYSKVFAVRVDLRFPDQYKSYDNSAVTRFVESLKSQ
VKADYIAKTKHSDGFVHKSDVLYIWVQETGEHNKPHYHLCLFFNGNAYRSLGKFELGRSNMYNRIVKAWASALAIKTINA
QGLVHIPKHSCYFLDKTLPFTKTFEFRVLFIRLSYFAKVDSKYYGDRRHHYGCSRTPDIK

Sequences:

>Translated_220_residues
MRKNSNLNLLHCVEYFGLPVLKFKNGVYEEYLKRNYNVINQTLIMYSKVFAVRVDLRFPDQYKSYDNSAVTRFVESLKSQ
VKADYIAKTKHSDGFVHKSDVLYIWVQETGEHNKPHYHLCLFFNGNAYRSLGKFELGRSNMYNRIVKAWASALAIKTINA
QGLVHIPKHSCYFLDKTLPFTKTFEFRVLFIRLSYFAKVDSKYYGDRRHHYGCSRTPDIK
>Mature_220_residues
MRKNSNLNLLHCVEYFGLPVLKFKNGVYEEYLKRNYNVINQTLIMYSKVFAVRVDLRFPDQYKSYDNSAVTRFVESLKSQ
VKADYIAKTKHSDGFVHKSDVLYIWVQETGEHNKPHYHLCLFFNGNAYRSLGKFELGRSNMYNRIVKAWASALAIKTINA
QGLVHIPKHSCYFLDKTLPFTKTFEFRVLFIRLSYFAKVDSKYYGDRRHHYGCSRTPDIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfjJ [H]

Homologues:

Organism=Escherichia coli, GI1786473, Length=180, Percent_Identity=34.4444444444444, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788979, Length=196, Percent_Identity=34.1836734693878, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021723 [H]

Pfam domain/function: PF11726 DUF3296 [H]

EC number: NA

Molecular weight: Translated: 25925; Mature: 25925

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNSNLNLLHCVEYFGLPVLKFKNGVYEEYLKRNYNVINQTLIMYSKVFAVRVDLRFPD
CCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCH
QYKSYDNSAVTRFVESLKSQVKADYIAKTKHSDGFVHKSDVLYIWVQETGEHNKPHYHLC
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCCCCEEEEE
LFFNGNAYRSLGKFELGRSNMYNRIVKAWASALAIKTINAQGLVHIPKHSCYFLDKTLPF
EEECCCHHHCCCCEECCHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEEECCCCC
TKTFEFRVLFIRLSYFAKVDSKYYGDRRHHYGCSRTPDIK
CCCHHHEEEEEEHHHHHHHHHHHCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MRKNSNLNLLHCVEYFGLPVLKFKNGVYEEYLKRNYNVINQTLIMYSKVFAVRVDLRFPD
CCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCH
QYKSYDNSAVTRFVESLKSQVKADYIAKTKHSDGFVHKSDVLYIWVQETGEHNKPHYHLC
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCCCCEEEEE
LFFNGNAYRSLGKFELGRSNMYNRIVKAWASALAIKTINAQGLVHIPKHSCYFLDKTLPF
EEECCCHHHCCCCEECCHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEEECCCCC
TKTFEFRVLFIRLSYFAKVDSKYYGDRRHHYGCSRTPDIK
CCCHHHEEEEEEHHHHHHHHHHHCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]