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The map label for this gene is ybgI [C]

Identifier: 113969993

GI number: 113969993

Start: 1953162

End: 1953914

Strand: Direct

Name: ybgI [C]

Synonym: Shewmr4_1653

Alternate gene names: 113969993

Gene position: 1953162-1953914 (Clockwise)

Preceding gene: 113969992

Following gene: 113969996

Centisome position: 41.5

GC content: 50.86

Gene sequence:

>753_bases
ATGACTCGGACAGAACTAACCCAATATTTAGCCGATTTTTTGCGAGTATCGGCATTTAAAGATTACGCTCCCAATGGTTT
GCAGGTTGAAGGTAAAGCAGAGATCCGCACCATAGTGACAGGTGTGACTGCGTCCCAAGCGTTAATCGATGAAGCGATTC
GCCTCAAAGCCGATGCGATTTTGGTTCACCATGGCTTTTTCTGGAAGAGTGAACCAGAGGTGATCATCGGCATGAAACAA
CGCCGGATCAAAGCGTTACTCGCCCATGATATCAACCTGTTTGGTTACCACTTACCCTTAGATGCTCACCCTATGTTGGG
CAATAATGCTACGCTTGGCCGTAAACTTGGGATCTTAGATGCCGAATCTGTCGAAGATGTGGCGCAGGGGCTCGTGTGGC
GTGGCAAACTGGATTTACCTGTCAGTGCCAGTGAATTTGCCGCGACCTTAGGTGAAGTACTTGGCAGAACGCCACTGCAT
ATTGGCGAGAGTTCGGATGAAATCCAATACTTAGCTTGGTGCACGGGCGGTGCGCAGGATTATATCGATGTTGCCGCAAG
CCTTGGGGTCGATGCGTTTATCAGTGGTGAAGTGTCTGAGCGGACGTTCCACAGCGCGGTGGAGCAGGGTATTCACTATT
ATGCGGCGGGTCACCATGCGACCGAGCGTTTTGGCATTGAGGCGCTGGGGCGTCATCTCGCCCGCGAATTCAATTTAGTG
CACCATTTTGTGGATATCGCGAACCCTGTCTAA

Upstream 100 bases:

>100_bases
GTACCTGCAAGGTGGGGTTCGCGTTGATTTAGCCATGTGATACAGTACGAACTTAAGCGTAACTGCCTATAATCAATACA
AAAGTGTAAACGGTGATGGA

Downstream 100 bases:

>100_bases
TGGCGTTGCCTTATTGACATCTTTCAAACAAAAGGCGAGCCATGCTCGCCTTTGTCGTATGTAAATTACCCCTCAGTTTA
AATCAGCCCTAGGGTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTASQALIDEAIRLKADAILVHHGFFWKSEPEVIIGMKQ
RRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAESVEDVAQGLVWRGKLDLPVSASEFAATLGEVLGRTPLH
IGESSDEIQYLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFNLV
HHFVDIANPV

Sequences:

>Translated_250_residues
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTASQALIDEAIRLKADAILVHHGFFWKSEPEVIIGMKQ
RRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAESVEDVAQGLVWRGKLDLPVSASEFAATLGEVLGRTPLH
IGESSDEIQYLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFNLV
HHFVDIANPV
>Mature_249_residues
TRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTASQALIDEAIRLKADAILVHHGFFWKSEPEVIIGMKQR
RIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAESVEDVAQGLVWRGKLDLPVSASEFAATLGEVLGRTPLHI
GESSDEIQYLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFNLVH
HFVDIANPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=58.4, Blast_Score=285, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27407; Mature: 27276

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTASQALIDEAIRLKADAI
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHEEHHHHCCHHHHHHHHHHHHHHHCEE
LVHHGFFWKSEPEVIIGMKQRRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILD
EEEECCEECCCCCEEECCHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCEECCCC
AESVEDVAQGLVWRGKLDLPVSASEFAATLGEVLGRTPLHIGESSDEIQYLAWCTGGAQD
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCHH
YIDVAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFNLV
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
HHFVDIANPV
HHHHHHCCCC
>Mature Secondary Structure 
TRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTASQALIDEAIRLKADAI
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHEEHHHHCCHHHHHHHHHHHHHHHCEE
LVHHGFFWKSEPEVIIGMKQRRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILD
EEEECCEECCCCCEEECCHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCEECCCC
AESVEDVAQGLVWRGKLDLPVSASEFAATLGEVLGRTPLHIGESSDEIQYLAWCTGGAQD
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCHH
YIDVAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFNLV
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
HHFVDIANPV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]