| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969904
Identifier: 113969904
GI number: 113969904
Start: 1842909
End: 1843265
Strand: Direct
Name: 113969904
Synonym: Shewmr4_1562
Alternate gene names: NA
Gene position: 1842909-1843265 (Clockwise)
Preceding gene: 113969903
Following gene: 113969905
Centisome position: 39.16
GC content: 44.26
Gene sequence:
>357_bases ATGGTCACAGATAAAGACGGTTACATGCATTTGATCCAGTATTTGACTGAGCATCTTGGCTTGTTCGAAACACCCGATAC CCAAAATGTGTCCGACGATACCGTGATGGAGTTGTTCGAAGAACAATTATCCGCGCAGATTATTATGGTTTGTGGGCAAA ATCCTTCCCTCTCTTTCGCCGAACGTAATACCATTATCCGTGAGGTCGATGCGATTGTGTACGATCTCGAAGAGATCTTA GCCTCAGTCGCGAATCATAAGGCTACGCCAGAGCAGACCCTGTTCATCACTGAGTTTTCAGGCCTAATCAAGAATTTATT CGATCAAGAAATCGCGAAAATCCAAGTGCATGCTTAA
Upstream 100 bases:
>100_bases GTGGCTGGCGTGCAAATCTTTATATCGACCACTTTAGATGTGGGTTTTGTTTTTTCAGTGTCGTCTCTGACGATAGATTT TGGTGTGTTAAGGGTAAAAA
Downstream 100 bases:
>100_bases TACTTTGCTGCACCATAGGATTCGCCTCTATTCTTGGGTGAGTCCTATCGCTATTGCGTAACGCCTCGACTTTACTCTTA GATTTAGTGACCATATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHKATPEQTLFITEFSGLIKNLFDQEIAKIQVHA
Sequences:
>Translated_118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHKATPEQTLFITEFSGLIKNLFDQEIAKIQVHA >Mature_118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHKATPEQTLFITEFSGLIKNLFDQEIAKIQVHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13374; Mature: 13374
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHH ERNTIIREVDAIVYDLEEILASVANHKATPEQTLFITEFSGLIKNLFDQEIAKIQVHA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHH ERNTIIREVDAIVYDLEEILASVANHKATPEQTLFITEFSGLIKNLFDQEIAKIQVHA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA