Click here to switch to the map view.

The map label for this gene is 113969875

Identifier: 113969875

GI number: 113969875

Start: 1808445

End: 1808960

Strand: Direct

Name: 113969875

Synonym: Shewmr4_1533

Alternate gene names: NA

Gene position: 1808445-1808960 (Clockwise)

Preceding gene: 113969874

Following gene: 113969876

Centisome position: 38.43

GC content: 50.39

Gene sequence:

>516_bases
ATGGATAAGGCGACCTTAGCATTTAGCCGCTTCCATAAGCGCGCCTTAGTCTTAGTGGTGTTTACCGCCGCAGCATTGCT
GATAAGCATCAACTGGCGAATCGCTCAGTTTGAGCAGTTATTACAAGATGGCCAAGTGGTACGTTTTGCCTTAGCGCCAG
TGGATCCTCGCTCGATTATGCAGGGGGATTATATGGCTTTGGAGTATGCCATTGCACAGGAGGTACGCGCCGCACTGCCT
GAAGGGATGGCGCAGGGGCAATTGCTGTTGACGCTCGACGCGCAAAAAGTGGCGCACTTTGTTGGTATTTACCGTGATCA
ACCCAAAACGGCTGAGCAACTCACGGTAGATTTTCGTCTGCGTAATCATAGAGTAAAGCTCGCCTCAAATAGTTTCTTCT
TCGAAGAGGGTCAAGCTGACCACTTCAGCCAAGCCAAGTATGGAGAATTCAGAGTCAGCGAACGGGGAGAGTTGTTGTTG
GTGAATCTGCTGGATGAGCAGTTGCAGCCGTTATAG

Upstream 100 bases:

>100_bases
ATTTAATGGGATTAGGCGGAGTGCTGATTATCGCAAGGTTACTGATGTGGCGCTTTTTTCCGATCACGCAAGTGCAGGTT
GAGCATAAGGAGCAAGCATA

Downstream 100 bases:

>100_bases
CGGGTAACCCTGATGATCGTTAACAAGATGGCGAGTCAGGCTCGCCATCTTCGCTATTTTTCCTAGTCCAATCCGCTAAA
TCGTCGCCTAAATATCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMAQGQLLLTLDAQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSERGELLL
VNLLDEQLQPL

Sequences:

>Translated_171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMAQGQLLLTLDAQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSERGELLL
VNLLDEQLQPL
>Mature_171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMAQGQLLLTLDAQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSERGELLL
VNLLDEQLQPL

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19408; Mature: 19408

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHH
QGDYMALEYAIAQEVRAALPEGMAQGQLLLTLDAQKVAHFVGIYRDQPKTAEQLTVDFRL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHEEEEEEE
RNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSERGELLLVNLLDEQLQPL
ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHCCCC
>Mature Secondary Structure
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHH
QGDYMALEYAIAQEVRAALPEGMAQGQLLLTLDAQKVAHFVGIYRDQPKTAEQLTVDFRL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHEEEEEEE
RNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSERGELLLVNLLDEQLQPL
ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA